| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0029 |
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| Symbol | |
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| ID | 9136682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 38564 |
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| End bp | 42169 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003628081 |
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| Protein GI | 296120303 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.167421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCT TTCGGCATAT CGCTCACACT CTTGCCAGCT ATCGTTGTGT GACACCACTT
GTCTTGACGC CGGCTGTGCT CATGGCGGGC CTGGTCTTTG CTGCTGATCC CAAGCCCATT
TACGAAAGCC CGATTGTCTC TGCTGAGACG AAGGGCCACA GTGTCGCCAT TGATGTTCCC
TTGAATGGCG CGAAAGAACT TTACCTGGTT GTCAGTGATG CCGGTGATGG CTTTGGTTGC
GATTGGGCCG ACTGGATTGA ACCAACCCTC ACCACTTCGC AAGGTCAGGT CAAGCTGACG
GATCTCAAGT GGAGTCGCGC GGAATCGGGC TACGGGCAGG TTCAACTCAA CCACAGTTGC
GGCGGTGATG CTCTCATGGT TGCAGGTGTG CAGCCTTCCT TTGGCATTGG TACGCACGCC
AACTCGCTGA TTGCCTACAA GCTTCCTGAA GGAACAACAC GCTTCCAGGC CCGGGGTGCC
ATTGATGATG GTGGTGCCAA TCAAGGCTGT GGCAGCACCG TGAAGTTCGC TGTCTACACG
CAGGCTCCAT CACCTAAAGC GACTCAAGCA ACTGGCGGAA GTGCCGGGAG CCGAGAACTG
GCCAAAGCGG TGGATCAGCT GGATGCCGGT GAAGGGCTCG AAGCGACGCT CTTTGCCGGT
GAGCCGATGA TGCTCAACCC GACCAACATC GACATCGATC CGCAGGGCCG CGTCTGGGTC
TGCGAAGTGG TGAACTACCG CCACCACAAC GGCGAGCGTC CCGAAGGTGA CCGCATTCTC
ATTCTCGAAG ACACGAATGG CGATGGCGTT GCCGACAAAT CGACCGTCTT TTATCAGGGG
AACGATGTCG ATTCGGCTCA CGGGATTTGT GTGCTGGGTG ATCGAGTCAT TATCTCAGCC
GGCGATACCG TTTTCTCACT CTATGACCGC AATCACGATC TTAAGGCCGA TCCTGGTTCC
AAAGAGATTC TGTTCACCGG GATCGAAGGC AAGCAGCACG ATCACGGCAT CCATGCGTTT
GTTCTCGGCC CCGACGGAAA GCTCTATTTT AACTTCGGTA ACTCAGGCCG CCGTCTGAAA
GACAAGGATG GCAAGGTCGT GGTTGATCTG AGTGGGCGTG AAGTCCACGA TCATCGGAAG
CCTTATCAGG AGGGGATGGT CTTCCGATGT GATCTGGATG GTTCCCATGT GGAGACTCTG
GGCTGGAACT TCCGCAACAA TTGGGAAGTC TGCGTCGATT CCTTTGGTTC GATGTGGCAA
TCCGATAACG ATGATGATGG CAACCGTGGC GTGCGCATTA ACTACGTGAT GGAGTTTGGC
AACTACGGCT ACAAGGACGA ATTCACAGGT GCCGGCTGGC AACAGCCACG CACTAATCTG
GAAACAGAGA TCCCCCTTCG CCACTGGCAC CTGAATGATC CGGGCGTCAT GCCCAATCTG
CTACAGACAG GTGCGGGTTC ACCGACTGGA ATTCTAGTTT ATGAAGGCAA ACTGCTCCCT
GCGATTTTTC GCAATCAGAT CATCCATTGT GATGCCGGCC CGAATATTGT GCGTGCTTAT
GTGACGAAAC CTGACGGGGC CGGCTACTCG GCGGAAATGG TCAATATTCT CGAAGGCAAA
CGGGACCAGT GGTTCCGTCC CAGCGATGTC TGCGTGGCTC CCGATGGATC ATTGATTATT
GCTGACTGGT ATGATCCGGG CGTTGGTGGA CACCGCGCCG GCGATGTGGA AAAAGGTCGT
TTGTTCCGGG TGGCTCCGCC GGGTGCTCCT TACAAATTCC CCAAGCCTGA TTTCAGCACG
GTTGAAGGTG CTATTGCCCA ACTGGCCAGC CCCAATCTGT CAGCCCGGTC GCAGGCCTAT
CTCGTGCTGG AAAAGATGGG TGCCAAAGCC GAACCCGCGC TCTTGGCACT GTTTGAAACA
TCCAAAGAAC CTCGCCTGAG GGGACGAGCC CTGGGGCTCT TGAAAAAGAA TCCCGCCGTC
TTGCAGAAGG CTCTCAAGGA CAGCGATGCC GACATCCGCA TCGCGGCTCT GCGGCTTATC
CGTCAGGTCT ACAGCCCGGT CGCGGGTTCG AAGAACACGA CGGTACTGAC ACAAGCGATC
GGCCAGCTGG TCAGCGATCC CAACGCAGCG GTTCTTCGCG AATGCCTGGT CGCGCTGGCG
ACCTCCCACG CCTCAGCCGA TGATGTCCAC GGGAAGGGCG TACATGTCAT TCCCCAGAAG
GCCGAACTAT GGGCTCAGTT GGCCAACCAG TATCAGGGGA GCGATCGCTG GTATCTGGAA
GCCCTGGGCA TTGGTGCCGA AGGGGATTGG GATGCCTGTC TGGGTGCCTA TCTCAAGGCT
CATCCCAACG CCGCAGAAAC GCTGGCAGGC AGGGATATCA TCTGGCGATC AAGAGCTGCA
CAAACGCCGG AACTGCTGGC GAAGATCATC TCTGATCCAA AGACACCCGC TGAGGAACTG
CCGCGTTACT TCCGTGCGTT TGACTTCCTC ACTTCTCCCG CGAAGGATGA GGCGATTACA
CAACTCGCTT TTGCGACACA GCCGATGCCT GATGGACGCG ACAAGCTGAT CCTGGCGGAA
GCACTGGGAA GACTGAAATC GTTTGATCCC GAAAGCAATC CTGCTCGCAA AGCTGCACTG
GCCCGTGTGC TTGAAACAAC GCGCGGGACA CCTGCCTATA TTACGCTGGT GGATCGCTTC
AACATGCAGG CCGAATATCC TGGACTGCTG GCACTTGCGA AGGCCCAGGC CGATAGCCAG
CTGGGTGTCG ATGCAGCTCG TGTGCTGGTC GCGAAGAATC AGGGAGTACT CATCGAAGCA
GCTCTCGTTT CGAAAGCACC GGGTGATTTC AGTGGAGCCG CAATTCTGCG GGCGATTGGC
AATGCTGGTG GTGGTGAAGC GATCAAGCTC CTCCGCAAGC TGGCCCTCGA TGACAAGCAG
CCTAACGAAG TCCGTATGGA AGCGATTCGT GGTTTGGCCA AATCTCAGCA GGGAGCTGAA
CAACTCATCA ATCTGGCGAA AGAACAGAAG CTGCAGGGAG ATTCGCTGGC GATTGCTGGT
TTTGCCGTGC AGGCGGCCAA TCATCCGAAA CTCAAATCGC AGGTGGATGC CATCTTCCCG
CCGCCACCAT CCCGTAATGA CAGTCCTTTG CCACCTCTGG CACAGTTGAT TAAGAACAAA
GGTAACATCA CCAAGGGTCG AGAGATTTAC TTTGGTGTGG GGACTTGTGC GAAATGCCAC
CAGGTCGGTT CTGAGGGCAA AGATGTCGGC CCGGCACTCA CTGAGATTGG CTCGAAGCTG
AGCCGCGAGG CGATGTTCGA ATCGATTCTT TATCCCAGTG CGGGGATCAG CCACAACTAC
GAAAGCTTTG TGGCGGAACT CTCTGATGGT ACCAGTGTGA TTGGCCTGCT GGTCAATCAG
ACCGATCAGG AGGTGGCTCT GAAGAGTGCT GACGGATTGA TCAAGACGGT CAAACGATCG
GACATTGAGG AATTGACGAA GCAGAAGATT TCGCTCATGC CCGCCGATCT TCAGAAACTG
ATGACGGCCC AGGAACTTGT CGATCTCGTT GAGTATCTGC AGACTCTCAA GAAAAGTGGA
AATTGA
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| Protein sequence | MFSFRHIAHT LASYRCVTPL VLTPAVLMAG LVFAADPKPI YESPIVSAET KGHSVAIDVP
LNGAKELYLV VSDAGDGFGC DWADWIEPTL TTSQGQVKLT DLKWSRAESG YGQVQLNHSC
GGDALMVAGV QPSFGIGTHA NSLIAYKLPE GTTRFQARGA IDDGGANQGC GSTVKFAVYT
QAPSPKATQA TGGSAGSREL AKAVDQLDAG EGLEATLFAG EPMMLNPTNI DIDPQGRVWV
CEVVNYRHHN GERPEGDRIL ILEDTNGDGV ADKSTVFYQG NDVDSAHGIC VLGDRVIISA
GDTVFSLYDR NHDLKADPGS KEILFTGIEG KQHDHGIHAF VLGPDGKLYF NFGNSGRRLK
DKDGKVVVDL SGREVHDHRK PYQEGMVFRC DLDGSHVETL GWNFRNNWEV CVDSFGSMWQ
SDNDDDGNRG VRINYVMEFG NYGYKDEFTG AGWQQPRTNL ETEIPLRHWH LNDPGVMPNL
LQTGAGSPTG ILVYEGKLLP AIFRNQIIHC DAGPNIVRAY VTKPDGAGYS AEMVNILEGK
RDQWFRPSDV CVAPDGSLII ADWYDPGVGG HRAGDVEKGR LFRVAPPGAP YKFPKPDFST
VEGAIAQLAS PNLSARSQAY LVLEKMGAKA EPALLALFET SKEPRLRGRA LGLLKKNPAV
LQKALKDSDA DIRIAALRLI RQVYSPVAGS KNTTVLTQAI GQLVSDPNAA VLRECLVALA
TSHASADDVH GKGVHVIPQK AELWAQLANQ YQGSDRWYLE ALGIGAEGDW DACLGAYLKA
HPNAAETLAG RDIIWRSRAA QTPELLAKII SDPKTPAEEL PRYFRAFDFL TSPAKDEAIT
QLAFATQPMP DGRDKLILAE ALGRLKSFDP ESNPARKAAL ARVLETTRGT PAYITLVDRF
NMQAEYPGLL ALAKAQADSQ LGVDAARVLV AKNQGVLIEA ALVSKAPGDF SGAAILRAIG
NAGGGEAIKL LRKLALDDKQ PNEVRMEAIR GLAKSQQGAE QLINLAKEQK LQGDSLAIAG
FAVQAANHPK LKSQVDAIFP PPPSRNDSPL PPLAQLIKNK GNITKGREIY FGVGTCAKCH
QVGSEGKDVG PALTEIGSKL SREAMFESIL YPSAGISHNY ESFVAELSDG TSVIGLLVNQ
TDQEVALKSA DGLIKTVKRS DIEELTKQKI SLMPADLQKL MTAQELVDLV EYLQTLKKSG
N
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