Gene Snas_6471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6471 
Symbol 
ID8887697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6824797 
End bp6826638 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content67% 
IMG OID 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003515179 
Protein GI291303901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0431978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC AGCCTCGCCT ACTCGGCGGC CGGTACGAGA TCGGTGGAAT GATCGGCTAT 
GGCGGCATGG CCGAGGTGCA CCGGGGTCGC GACATCCGGC TCGGTCGCGA CGTGGCCATC
AAGATGCTGC GCACCGACCT GGCGCGAGAC GAGACCTTCC TGACCCGGTT CCGGCGCGAG
GCCCACAACG CCGCGACCCT GAACCATCCG TCGATCGTGG CGGTCTACGA CACCGGCGAG
GACACCGACT CCGGGGTCCC GGTTCCGTAC ATCGTGATGG AGTTCGTGGA GGGCCGCACC
CTCAAGGAGG TGCTGACGGC CGAGGGTCGG CTGTCGCCGC GGCGCGCCTG CGAGATCCTC
GCCGACGTGT GCGCGGCGCT GGACTTCAGT CATCGCCACC AGATCATTCA CCGGGACGTC
AAGCCGGGCA ACGTGATGCT GTCCAGCAAC GGCCAGATCA AGGTGATGGA CTTCGGCATC
GCCCGGGCGC TGGCCGCCGG GCAGGCCACC ATGACCCAGA CTTCGGCCGT CATCGGCACC
GCCCAGTACC TGTCACCGGA ACAGGCACGC GGCGAGACCG TCGACGCTCG TTCCGACGTC
TACGCCTCCG GCTGCCTCAT CTACGAACTG CTGTGCGGCG AACCGCCGTT CACCGGCGAC
AACCCGGTGA GCGTCGCGTA CCAGCACGTG CGGGAGGCGC CGATCCCGCC CAGCCACCGC
AACCCGGACG TGCCGCCCTC GGTCGACGCG ATCACGTTGA AGGCGCTGGA GAAGAACCCG
ATCAACCGGT ACCAGAGCGC GGGCGAGATG CGCGACGACC TGGAGCGGGC GATCGCCGGG
CGGCCGGTGC TGGCGACTCC GGTGATGAGC CAGGAGGAAC GCACCCAGTT GTTGGCCGCG
CAGCGTGCCG ACGACACCCG GGTGGCGCCG GTCGTGTCCG ACCGTCCCAA GAAGAACACC
GGCAAGAAGG TCGCGGCCGC GGTCATCGCG CTGGCGCTGG TGGCGGGTCT GGGGTTCCTG
ACCTGGTACC TGACGGCGGG CGACGGTGCC ACGGTCGCGG TGCCCAAGGT CGTGGGGATG
AAAGAGGCCG AGGCGGTCGA GAGGATCGAG AAGGCCGAGC TCAAGGCGAA GGTCGAGGAG
GTGCCGTCCT CCGACCAGGA GAAGGGCGAC GTCACCGATC AGGATCCGGG CGCCCTGAAG
AAGGTCGAGA AGAACTCCAC CGTGATCCTC AAGGTGGGCA AGGGACGGAC GACCGTCACG
GTCCCCGATC TGTCCAATCT CATCGGTTGC CCGGAGATGA AGTCGAAACT CAAGGCCGCC
GAGCTCAAGA TCAAGTGCGA AGAGGTCTCA AGCTCCAAGG ACAAGGGAGC GTTCATCGAC
CAGCAACCGG ACGCGGGCGA GAAGCTGAAG TCCGGTGAGA CCGTCGAGGT CAAGGTCTCC
AACAACGACA CCACCACGGT GCCGGACGTG TCCGGTATGT CGGAGCAGAA GGCCTGCAAG
AAGATCGAGG AAGCCGGGTT CAGCTGCGAC GTCAGTTCCG ACCTGCAGGC CGTCAGCGAC
CCCGACGACG CGGGCAAGGT CGTGGATCAG ACGCCGGACG CCGAGGCTGA GGCGGAGAAG
AACTCGACCG TCACCATCTA CATCGGCGGT ATCCAGGTGC CGAAGCTGCG GGAGCTGACG
GTCGAGGAGG CCCGCGACGC CGCCGAGGAG GCGGGCCTGG AGTTCGACGC CGGAAGCGCG
CCCGACGACT TCATCGTGGA AAGCCAGGAT CCGCCCGAGG GCGAGGTCGT CGAGGACGGC
ACGACGGTGA CGGTGACGGC CCAACCCGAT ATCGGCACCT GA
 
Protein sequence
MTAQPRLLGG RYEIGGMIGY GGMAEVHRGR DIRLGRDVAI KMLRTDLARD ETFLTRFRRE 
AHNAATLNHP SIVAVYDTGE DTDSGVPVPY IVMEFVEGRT LKEVLTAEGR LSPRRACEIL
ADVCAALDFS HRHQIIHRDV KPGNVMLSSN GQIKVMDFGI ARALAAGQAT MTQTSAVIGT
AQYLSPEQAR GETVDARSDV YASGCLIYEL LCGEPPFTGD NPVSVAYQHV REAPIPPSHR
NPDVPPSVDA ITLKALEKNP INRYQSAGEM RDDLERAIAG RPVLATPVMS QEERTQLLAA
QRADDTRVAP VVSDRPKKNT GKKVAAAVIA LALVAGLGFL TWYLTAGDGA TVAVPKVVGM
KEAEAVERIE KAELKAKVEE VPSSDQEKGD VTDQDPGALK KVEKNSTVIL KVGKGRTTVT
VPDLSNLIGC PEMKSKLKAA ELKIKCEEVS SSKDKGAFID QQPDAGEKLK SGETVEVKVS
NNDTTTVPDV SGMSEQKACK KIEEAGFSCD VSSDLQAVSD PDDAGKVVDQ TPDAEAEAEK
NSTVTIYIGG IQVPKLRELT VEEARDAAEE AGLEFDAGSA PDDFIVESQD PPEGEVVEDG
TTVTVTAQPD IGT