Gene Snas_6458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6458 
Symbol 
ID8887684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6810509 
End bp6813103 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content70% 
IMG OID 
ProductATP-dependent chaperone ClpB 
Protein accessionYP_003515166 
Protein GI291303888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGTCG ACCGCTTGAC GACCAAGAGC CGGGAGGTCA TCTCCACCGC CGCGACCAGC 
GCCGCCGAGT CCGGGCACGC CACCGTCGAG TCCTGGCATC TGCTGTCGGC ACTGCTGGCC
GTCGACGGAT CGACCGCTCC CGGACTGCTG CGCGCCGTGG GCGCCGACCC GGGCGCCCTG
ACCACCGCCG TCGAAGCCGG ACTGCGCGCG CTGCCCAGCG CCCGCGGCTC GTCCGTCGGT
GAACCCTCGA TGTCGCGGGA ACTGCTCAAC GCGATCAACT CCGCCGACCG CATCGCCGAC
GCCGGTGGCG ACGAGTACGT CTCGACCGAA CACCTGCTGG CCGGGCTGGC CCGGGTGGGT
GGGCCGTGCG GCGACGCCCT GGCCGAGGCC GGGGCCACCG AGAAGAACCT CATCGAGGCG
TTCCCGGCGA TCCGGGGCGG CGATCGCAAG ATCACCAGCT CCGACCCGGA GGGCAGCTTC
AAGGCGCTGG AGAAGTACGG GATCGACCTG ACCGCCGCCG CCAAGGAGGG CAAGGTCGAC
CCGGTCATCG GCCGCGACAC CGAGATCCGC CGGGTCATCC AGGTCCTGTC GCGCCGCACC
AAGAACAACC CGGTCCTCAT CGGCGAACCC GGTGTCGGCA AGACCGCCAT CGCCGAGGGC
CTGGCGCAGC GCATCATCGC CGGGGACGTC CCCGAGTCGC TGCGCGACCG CAAGGTCGTG
TCGCTCGACC TGGGCGCCAT GGTCGCCGGA GCCCAGTACC GGGGCCAGTT CGAGGAACGG
CTGAAGTCGG TGCTGGAGGA GATCAAGGCC TCCGACGGCC AGATCATCAC CTTCCTCGAC
GAACTGCACA CGATGGTCGG CGCGGGCAAG TCCGAGGGCT CCATGGACGC GTCCAACATG
CTCAAACCGA TGCTGGCGCG CGGCGAACTG CGCATGGTCG GTGCCACCAC ACTGGACGAA
TACCGGCAGC ACATCGAGAA GGACGCCGCC CTGGAACGCC GGTTCCAGCC GGTGCTCGTC
GGCGAACCGT CCACCACGGA CACCGTCGGG ATCCTGCGCG GCCTCAAGGA ACGCTACGAG
GTCCACCACG GCGTCCGCAT CACCGACGGC GCCCTGGTCG CCGCCGCCTC ACTGTCCGAT
CGCTACATCA CCGACCGGTT CCTGCCCGAC AAGGCCATCG ACCTCATCGA CGAGGCGGCC
TCCCGGCTGC GGATGGAGAT CGACTCCCGT CCGGTCGAAG TGGACGAGAT CGAACGCGCC
GTCAAACGGC TCGAGATCGA GGAGATGGCG CTGCAGAAGG AGGCCGACGA GGCCTCGGCC
GAGCGGTTGG AACGACTGCG CCGCGAACTG GCCGACAAAC GCGAGGAGCT GTCGGCGATC
TCGCAGCGCT GGGGCGTGGA GAAGGAGCAC ATCACCGCGA TCTCCCAGAT CAAGGAGGAG
CTGGAGCAGC TGCGCGGCGA GGCCGAGCGG GCCGAGCGCG ACTCGGACCT GGCCAAGGCC
TCCGAACTGC GCTACGGCCG GATCCCGCAG CTGGAACAGC GACTGATCCA GGCCGAGTCC
GAGCTGGCCA AGCTGCAGAA CGACGGCTCC ATGCTCAAGG AGGAGGTCGA GAGCGACGAC
ATCGCCGAGG TCGTGGCCTC CTGGACCGGC ATCCCGGCGG GCAAGCTGCT GGAGGCCGAG
ACCGCCAAAC TGCTGCGCAT GGACGAGGAG CTGACCCACC GGGTCGTCGG CCAGGACCGC
GCGGTGGCCG CGGTGTCCGA CGCGGTCCGC CGGGCCCGCG CGGGCATCGC CGACGAGAAC
CGGCCCACCG GCTCGTTCCT GTTCTGCGGT CCCACCGGTG TCGGCAAGAC CGAACTGGCC
AAGGCGCTGG CCTCGTTCCT GTTCGACGAC GAGCGCGCCA TGGTGCGCAT CGACATGAGC
GAGTACTCCG AACGCCACTC GGTGGCCCGG CTGGTCGGCG CCCCGCCCGG CTACGTCGGC
CACGAGGAGG GCGGCCAGCT CACCGAGGCG GTGCGCCGCC GTCCGTACTC CGTCGTGCTG
CTGGACGAGG TCGAGAAGGC CCACCCCGGC GTCTTCGACA CCCTGCTCCA GGTCCTCGAC
GACGGACGGC TCACCGACGG CCAGGGCCGC ACGGTGGACT TCCGCAACAC GATCCTGATC
CTGACGTCCA ACCTGGGGTC CTCGGCGATC GCCGACCCGA CGCTGAGCCC GCACGAACGC
TCCGAAGCGG TGCTGGCCAA CGTCCGCGAC CACTTCAAAC CCGAGTTCCT GAACCGGCTG
GACGACATCG TCGTGTTCGA CGCGCTGTCC ACCGACGAAC TGAAGTCCAT AGTCGACGTT
CAGCTGCACC GGCTGTCGGA GCGGCTGGCC AACCGGCGCC TCCACCTGGA GGTCGACGAC
GCCGCCCGCG TCTGGCTCGC CGACCGCGGC TTCGACCCGG TCTACGGGGC CCGGCCGCTG
CGGCGCCTGA TCCAAAGCGC CATCGGCGAT CCGCTGGCCC GGCAGCTGCT GGCCGGAGAC
ATCACCGACG GCGACACGGT GACGGTCAGC GTCGCCGAGG ACGGCGGTTC CCTGGTGCCA
CGGAAACGTC CCTGA
 
Protein sequence
MNVDRLTTKS REVISTAATS AAESGHATVE SWHLLSALLA VDGSTAPGLL RAVGADPGAL 
TTAVEAGLRA LPSARGSSVG EPSMSRELLN AINSADRIAD AGGDEYVSTE HLLAGLARVG
GPCGDALAEA GATEKNLIEA FPAIRGGDRK ITSSDPEGSF KALEKYGIDL TAAAKEGKVD
PVIGRDTEIR RVIQVLSRRT KNNPVLIGEP GVGKTAIAEG LAQRIIAGDV PESLRDRKVV
SLDLGAMVAG AQYRGQFEER LKSVLEEIKA SDGQIITFLD ELHTMVGAGK SEGSMDASNM
LKPMLARGEL RMVGATTLDE YRQHIEKDAA LERRFQPVLV GEPSTTDTVG ILRGLKERYE
VHHGVRITDG ALVAAASLSD RYITDRFLPD KAIDLIDEAA SRLRMEIDSR PVEVDEIERA
VKRLEIEEMA LQKEADEASA ERLERLRREL ADKREELSAI SQRWGVEKEH ITAISQIKEE
LEQLRGEAER AERDSDLAKA SELRYGRIPQ LEQRLIQAES ELAKLQNDGS MLKEEVESDD
IAEVVASWTG IPAGKLLEAE TAKLLRMDEE LTHRVVGQDR AVAAVSDAVR RARAGIADEN
RPTGSFLFCG PTGVGKTELA KALASFLFDD ERAMVRIDMS EYSERHSVAR LVGAPPGYVG
HEEGGQLTEA VRRRPYSVVL LDEVEKAHPG VFDTLLQVLD DGRLTDGQGR TVDFRNTILI
LTSNLGSSAI ADPTLSPHER SEAVLANVRD HFKPEFLNRL DDIVVFDALS TDELKSIVDV
QLHRLSERLA NRRLHLEVDD AARVWLADRG FDPVYGARPL RRLIQSAIGD PLARQLLAGD
ITDGDTVTVS VAEDGGSLVP RKRP