Gene Snas_6433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6433 
Symbol 
ID8887659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6784361 
End bp6784999 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003515142 
Protein GI291303864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.522555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TTTCCGGCTG CGACGACAAG GAACTGTTGC GCCGTCACGC CACCGGAGGC 
GACCGGGACG CGTTCGGCGA ACTGTTCCGG CGGCACCGGG ATCGGCTGTG GGCGGTGGCG
CTGCGGACGC TGTCGGACCC CGAGGAGGCC GCCGACGCGT TGCAGGACGC CATGGTCAAC
GCCTACCGGG CCGCGGCCCG GTTCCGGGGC GACTCGGCGG TCACGACCTG GCTGCACCGC
ATCGTCGTCA ACGCCTGCCT GGACCGGGTG CGGCGCAAGC AGGCCCGTCC GGCGGTGCCG
ATGTCGGACC AGCTGCCGGA ACCGGCGATG CCCGGCGCCG ACCCCGCCGA CGCGGCCGGG
GTGCTGGCGG TGCGGCAGGC ACTGGCGGAA CTGCCCTTCG ACCAGCGGGC CGTCGTGGTC
TACATCGACA TGCTCGGCTA CCCGGTGGCC GACGTGGCCG CGATCCTCGA GATCCCGGCC
GGAACCGTGA AGAGCCGGGC GTCGAGAGCG CGCTCACAGT TGGCGACTTT GTTGAGCGAG
ATAGGGAACC GGGCCCCGGC CGGCGACGTC GGACCAATAG CGGGACCCGA CGCCGGTGAT
CCGGCCACCA CCACCTCGGG GAAGGAGGAG AAGCAGTGA
 
Protein sequence
MADLSGCDDK ELLRRHATGG DRDAFGELFR RHRDRLWAVA LRTLSDPEEA ADALQDAMVN 
AYRAAARFRG DSAVTTWLHR IVVNACLDRV RRKQARPAVP MSDQLPEPAM PGADPADAAG
VLAVRQALAE LPFDQRAVVV YIDMLGYPVA DVAAILEIPA GTVKSRASRA RSQLATLLSE
IGNRAPAGDV GPIAGPDAGD PATTTSGKEE KQ