Gene Snas_6389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6389 
Symbol 
ID8887615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6741792 
End bp6742955 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content69% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003515098 
Protein GI291303820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.447732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCG TTATCGCGCA CAACAGGTAC TCCTCGGCAC AGCCGTCCGG AGAGAACTCC 
ATGGTGGACA ACGAGATCCG CCAGCTCACC GAGGCCGGGG TGGAGGTGGT GCCGTTCCAG
CGTTCCAGCG ACGAGATCGC GTCGCTGTCG TTGCCGGGCA AGGTGGCGCT GGCCGCGTCG
CCGATCTACT CGCGTAGCAC CCAGAAGGAG CTGACCCGGC TGATCCAGAC CGAGAAGCCG
GACGTGTTCC ACCTGCACAA CCCGTACCCG TTCCTGTCCC CGGCGGTGGT GCGCACCGCG
CAGAAGCTGG GCGTGCCCGC CGTGCAGACC GTCCACAACT ACCGGCAGGT GTGCATGAGC
GCCATGTACT TCCGGGACGG TCACATGTGC CACGACTGCA AGGGGAAGTC CTTCGCGCTG
CCGGGCATCA AGCACGGCTG CTACCGGGGT TCGCGGGCCC AGAGCGTCAT CATGGCCACG
ACGCTGGCGG TCAACCGCTC GACCTGGCGC GGCATCGACC GCTACATCGC GCTGACCGAC
CACATCGCCG ATCACCTGCG GGACTACGGC ATCAGCTCCG AGCAGATCCG GGTGAAACCC
AACTCGATCC CCGACCCCGG CGTGCACGAC GAGACCGGTT CCGGCTTCAT GTACCTGGGT
CGGCTGTCGC CGGAGAAGGG CGTCGGGCTG CTGCTGGAGG CGTGGCGGCG GCACCCCGAG
GGCGCGCTGG GCACGCTGTC GATCATCGGC GACGGCCCGG ATCGCGCAAT GGTCGAGTCG
GCGGCGGCCG CCCGCTCCGA CATCGACTTC GTGGGTCCGC TGCCGCACGA CGAGATAGCC
GGACGGCTGC GCTCGGCGGC CGCCCTGGTG GTGTCCTCGC TGTGCGAGGA CGTGCTGCCG
ACCGTCGTCA TCGAGGCGCT GTCCAACGCG CGTCCGGTGC TGACCACCGA TCTGGGCGGT
CCGCCGCGCA TGATCGGCGA CGCCGGTGTC ATCGTCGAGC CCACCGCGGA CGGCATGGCG
CGGGGCCTGA CCGACATGCA CCGCACGGCG GCGTCATTGT CCGAAGTGGC CCGTAAGCGC
TACCTGAGCA CCTTCGCGCC CGAGGTGGTC GTGTCGCGGC AGCTGGACAT CTACGCCGAG
CTCTCGGCGG GTACCAGGGA CTGA
 
Protein sequence
MKVVIAHNRY SSAQPSGENS MVDNEIRQLT EAGVEVVPFQ RSSDEIASLS LPGKVALAAS 
PIYSRSTQKE LTRLIQTEKP DVFHLHNPYP FLSPAVVRTA QKLGVPAVQT VHNYRQVCMS
AMYFRDGHMC HDCKGKSFAL PGIKHGCYRG SRAQSVIMAT TLAVNRSTWR GIDRYIALTD
HIADHLRDYG ISSEQIRVKP NSIPDPGVHD ETGSGFMYLG RLSPEKGVGL LLEAWRRHPE
GALGTLSIIG DGPDRAMVES AAAARSDIDF VGPLPHDEIA GRLRSAAALV VSSLCEDVLP
TVVIEALSNA RPVLTTDLGG PPRMIGDAGV IVEPTADGMA RGLTDMHRTA ASLSEVARKR
YLSTFAPEVV VSRQLDIYAE LSAGTRD