Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6372 |
Symbol | |
ID | 8887598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6721765 |
End bp | 6722475 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative two component transcriptional regulator, winged helix family |
Protein accession | YP_003515081 |
Protein GI | 291303803 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTGA TAATTCTGAC GAACCAGGCT AAAGCCGTCC CCGCCTCGGT GCTGCCCGCG CTCGACCTCC TCGCCCACCG GGTCCGCTGC GCCAAGCCCG ACGTCGGCAC CCTGTTGTCG GGGCCGCAGT CCCACACGGT GCTGGTCGAC GCCCGCACCG ATCTGTCCGA GGCCCGCGCC ACCTGCCGGG TACTGCGCAC CGGCGGCATG ACCGTCCCGC TGATCGCGGT GGTGACCGAG GCCGGTCTGG CCGGGGTGCA CGCCGACTGG GGCATCGACG ACATCATCGT GAACACCGCG GGCCCGGCCG AGGTGGAGGC CCGGCTGCGG CTGGCGACCG GACGACTCGA GGTGCCCCCG GAGACCGGCC AGTCGACGGT CCGGGTGGGG GATCTGACCA TCGACACCGA GACCTACGCG GCGAAGCTCA AGGGCCGTCC GCTGGACCTG ACGTACAAGG AGTTCGAACT GCTGCGGTAC CTGGCGCAGC ACCCGGGGCG GGTGTTCTCG CGCGAGCAGC TGCTGCGGGA GGTGTGGGGC TTCGACTACT ACGGCGGCAC CCGCACCGTC GACGTCCACG TGCGGCGGCT GCGCGCCAAA CTCGGCAGCG AGAACGAGTC GATGATCGGC ACCGTCCGGC AGGTGGGGTA CAAGTTCGTG GCCCCGCCCG CGAAACCGCT GCCGGACTCG GCGCCGGTGG CCGTGGCCTG A
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Protein sequence | MDLIILTNQA KAVPASVLPA LDLLAHRVRC AKPDVGTLLS GPQSHTVLVD ARTDLSEARA TCRVLRTGGM TVPLIAVVTE AGLAGVHADW GIDDIIVNTA GPAEVEARLR LATGRLEVPP ETGQSTVRVG DLTIDTETYA AKLKGRPLDL TYKEFELLRY LAQHPGRVFS REQLLREVWG FDYYGGTRTV DVHVRRLRAK LGSENESMIG TVRQVGYKFV APPAKPLPDS APVAVA
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