| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6353 |
|---|
| Symbol | |
|---|
| ID | 8887577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6700932 |
|---|
| End bp | 6701630 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003515062 |
|---|
| Protein GI | 291303784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CTCCCCCCGA GTCCTTTGTC TACGAATCGC GCACGGTCGA TCCCCCGACC
CGCAACAGCA CCGCCGAATT CGTGGCCGGT CTCCTGCGCA CCGAGATCGC CGACGGCAAA
CGCCAGCCCG GCGACAAACT CCCCGAAGCC GAACTGTGCG AACTGCACCA GGTCTCCCGC
AACACCCTCC GCGAGGCCTT CCAGCTCCTC ACCCACGAAC GCCTGGTGAT CCACAACCTC
AACCGGGGCT TCAAGGTCCG CCGCCCCTCC GCGGAGGACC TCTCCGACAT CTACCGGGTC
CGCCGCGTCA TCGAATGCGG CGCCATCCGC TCGGCCGTCA TCGTCCCCGA ACGCCTGGCG
GGCCTCCAAC GAGCAGTCGC CGACGGCGAA CGCGCGGCCA AACAACACGA CGGCCGCGCC
GTGGGCTCGG CCAACATCCA GTTCCACCGC TCCATCGGCT CCCTGGCCGA GAGCGCCCGC
ATCGACGAGG TGATGAACCA GGTCCTGGCC GAACTGCGCC TGGTCTTCCA CGTCATGGGC
AACCACGGCG ACTTCCATCT GCCGTATCTC CCCAGAAACC GCGAGATCCT CGACTGCCTG
GCCGAACACG ACATCATGCG AGCCAGCCAG CTGCTGTCGA ACTACCTCGA CGACGCCGAG
GAGCAACTAC AGGCGGCCTA CGAAGAGGCC GACTCGTGA
|
|---|
| Protein sequence | MTTPPPESFV YESRTVDPPT RNSTAEFVAG LLRTEIADGK RQPGDKLPEA ELCELHQVSR
NTLREAFQLL THERLVIHNL NRGFKVRRPS AEDLSDIYRV RRVIECGAIR SAVIVPERLA
GLQRAVADGE RAAKQHDGRA VGSANIQFHR SIGSLAESAR IDEVMNQVLA ELRLVFHVMG
NHGDFHLPYL PRNREILDCL AEHDIMRASQ LLSNYLDDAE EQLQAAYEEA DS
|
|---|
| |