Gene Snas_6351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6351 
Symbol 
ID8887575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6698730 
End bp6699494 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID 
ProductLamB/YcsF family protein 
Protein accessionYP_003515060 
Protein GI291303782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGA CCATCGACCT CAACTGCGAT CTCGGCGAGG GTTTCGGCGT GTGGACGCTC 
GGCGACGACG AGGCGCTGCT GGACATCGTG ACCAGCGCGA ACGTCGCCTG CGGCTTCCAC
GCGGGCGACC CGTCGATCAT GCGGGCGGTT TGCGAACGCG CCGCCGCGCG GGGCGTGGCG
ATCGGCGCGC AGGTCGGCTA TCGCGATCTG GCCGGTTTCG GACGCCGGAA CATCGACGTC
GAACCGCGGG TGCTGACCGA CGAGGTGCTG TACCAGCTGG GCGCCCTCGA CGCGTTCGCG
CTGCGCGCCG GGGACCACGT CCGGTACGTC AAACCCCACG GCGCGCTGTA CAACCGGATC
GTCACCGACT CCGAGCAGGC GGCGGCGGTG GTCGCGGCGG TCACCGCCTA CGACCCGAAG
CTGGCGGTGC TGGGCCTGCC GGGCTCCCGG TTCCTGAAAC TGGCGGCCGA GGCGGGGCTG
GTCACCGTGA CCGAGGCCTT CGCCGACCGG GCTTACACCA CCGAGGGACG GCTGGTGCCC
CGGTCGCGGC CGGGAGCGGT GCTGCACGAC GCCGAGACGA TCGCGGGCCG GGTGCGCCGG
ATGGCCGTGG ACGGCCGGGT GGTCAGCATC GACGGCGTCG TCATCGACAT GACGGCCCAG
TCGGTGTGCG TCCACGGCGA CACCCCCGGC GCGGTGGACA TCGCCCGGCG GGTCCGGTCG
GCTCTGGACG AAGCCGGGAT CCACGTCTCG GCCTTCGCCA CCTGA
 
Protein sequence
MRRTIDLNCD LGEGFGVWTL GDDEALLDIV TSANVACGFH AGDPSIMRAV CERAAARGVA 
IGAQVGYRDL AGFGRRNIDV EPRVLTDEVL YQLGALDAFA LRAGDHVRYV KPHGALYNRI
VTDSEQAAAV VAAVTAYDPK LAVLGLPGSR FLKLAAEAGL VTVTEAFADR AYTTEGRLVP
RSRPGAVLHD AETIAGRVRR MAVDGRVVSI DGVVIDMTAQ SVCVHGDTPG AVDIARRVRS
ALDEAGIHVS AFAT