Gene Snas_6338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6338 
Symbol 
ID8887562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6682816 
End bp6683253 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003515048 
Protein GI291303770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGATG GTTGGTTCGT GATCTTGGAA GACCTGGTCC GGCTGCGCCG CGCTCGCGAC 
ACGATGGACC GCGAGTACGA CAAACCGCTG GACGTCCCGG CGCTGGCCCG GGTCGCGCTC
ATGTCGCCGG GTCACTTCTC GCGCAGCTTC CGGGCCGCGT ACGGCGAGAC GCCCTACAGC
TACCTGATGA CCCGCCGCAT CGAACGCGCC AAGGCGCTGC TGCGCAAGGG CGACCTGTCG
GTCACCGAGG TCTGCTTCGC CGTCGGCTGT ACCTCGCTGG GGTCCTTCAG TTCCCGGTTC
ACCGAACTCG TCGGCGAGAG CCCCAGCGCC TACCGCGCCC GCGACCACGC CGACGCCGCC
GCCATCCCAC CGTGCGTCGC CAAGGTGTAC ACCCGTCCGG TCAGGAATGG AGAAGCGAAG
CCCCCTGGCC AGCCGTAA
 
Protein sequence
MWDGWFVILE DLVRLRRARD TMDREYDKPL DVPALARVAL MSPGHFSRSF RAAYGETPYS 
YLMTRRIERA KALLRKGDLS VTEVCFAVGC TSLGSFSSRF TELVGESPSA YRARDHADAA
AIPPCVAKVY TRPVRNGEAK PPGQP