Gene Snas_6330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6330 
Symbol 
ID8887554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6676843 
End bp6677823 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCellulase 
Protein accessionYP_003515041 
Protein GI291303763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.708114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AGACAGTGGC CCTGGCGGGC CTGGCGGCCG CGGCCGTGGC GCTACCGGTG 
ACCTTGACCC TCTCGGCACA GGCCGAGGAC ACCGGCGACC CCGGCACCAA GGCGGGCGAG
TTCTACGTCG ACCCCGACAA CAACGCCGCC ACCTGGGTCA AGGAGAACGG CGACAACCCC
AACGCCGAGA AGATCAAGAC CTCCATCGCC GACAACGTCG TGGCCAAGTG GTTCGGCGAC
TGGGAGAACA TCCCGGTCTC CGAGTACGTG GCCAACGCCG CCGAGGCCGG AGGCGCTCCG
GTCCTGGTCG CGTACAACAT GTACCAGCGT GACTGCGGCG GCCAGTCCGG CGGCGGCGCC
GACTCCGTCG AGGAGTACAA GACCTGGATC GCCGACTTCG CCAAGGGCGT CGGCGACTCC
GACGCCTACG TGATCCTGGA ACCGGACGCG CTGTCCCAGA TGGTCGCGGG CAACTGCGAC
ATGGACGTCG CAGCCCGCAA GGAACTGCTG GCCTACGGCG TCGACCAGTT CGCGACCAAC
GCCCCCAACG CCAAGGTGTA CCTGGACGCG GGCAACTACT CCTGGCCCGG CGACGCGGGC
GCCATCGCGG ACGCGCTGAA GGACGCCGGG GTCGAGAAGA TCCGCGGCTT CGCGGTCAAC
GTCTCCAACC ACTACAAGAC CGACCAGTCG GACGAGAAGG CCAAGCAGAT CCTCGACGCG
CTGGGAACCG AGTCCCACTA CGTCGTCGAC ACCAGCCGCA ACGGCTCCGG CAAGACCCAG
GACGGCGAGG ACTCCTGGTG CAACCCGAAG GGCGCCACCC TCGGCGAGAC CTCCACCGTC
GGTGAAGGCG CCCAGGACGC GCGGATCTGG ATCAAGGTCC CCGGCGACTC CGACGGCGAC
TGCGGCTACG GCCAGGGCGT CCCGGCCGGG CAGTTCTCCG AGAAACTCGC CATGGGTCTG
ATCACCGGCG AGTACCCCTA A
 
Protein sequence
MKLKTVALAG LAAAAVALPV TLTLSAQAED TGDPGTKAGE FYVDPDNNAA TWVKENGDNP 
NAEKIKTSIA DNVVAKWFGD WENIPVSEYV ANAAEAGGAP VLVAYNMYQR DCGGQSGGGA
DSVEEYKTWI ADFAKGVGDS DAYVILEPDA LSQMVAGNCD MDVAARKELL AYGVDQFATN
APNAKVYLDA GNYSWPGDAG AIADALKDAG VEKIRGFAVN VSNHYKTDQS DEKAKQILDA
LGTESHYVVD TSRNGSGKTQ DGEDSWCNPK GATLGETSTV GEGAQDARIW IKVPGDSDGD
CGYGQGVPAG QFSEKLAMGL ITGEYP