Gene Snas_6311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6311 
Symbol 
ID8887535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6653997 
End bp6656561 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content66% 
IMG OID 
ProductATPase AAA-2 domain-containing protein 
Protein accessionYP_003515022 
Protein GI291303744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC GGTTTACCGA CCGAGCAAGG CGAGTTGTGG TCCTGGCTCA AGAAGAAGCC 
CGGATGCTCA ACCACAACTA CATAGGCACT GAGCACATCC TGCTCGGCCT GATCCACGAG
GGGGAAGGCG TCGCGGCCAA GGCCTTGGAA AGCCTGGGAA TCTCTCTTGA GGGCGTGCGG
CAGCAGGTTG AGGAGATCAT CGGTCAGGGC CAGCAGGCCC CCAGCGGGCA CATCCCCTTC
ACGCCTCGGG CGAAGAAGGT CCTGGAACTG AGCCTGCGCG AGGCGCTGCA ACTTGGCCAC
AACTACATCG GCACCGAGCA CATCCTGCTG GGCCTGATCC GCGAGGGTGA GGGCGTGGCG
GCGCAGGTGC TCATCAAGCT GGGTGCCGAC TTGAACCGCG TGCGTCAGCA GGTGCTGCAG
TTGCTGTCGG GTTATCAGGG CAAGGAGCCG GCGGGAGCCA CCGCCGGGGG GTCGGCCAGC
GGCGAGCAGT CGCAGTCGTC CTCGCCCGTG CTTGACCAGT TTGGACGCAA CCTGACGCAG
GCCGCCCGGG ACGGCAAGCT CGACCCGGTC ATCGGCCGCG AGAAGGAAAT CGAACGGGTC
ATGCAGGTGC TGTCGCGCCG CAGCAAGAAC AACCCGGTGC TGATCGGCGA GCCCGGCGTC
GGCAAGACCG CCGCCGTGGA GGGACTGGCG CAGGCCATCG TCAAGGGCTC GGTCCCCGAG
ACCCTCAAGG ACAAGCACCT GTACACGCTG GACCTCGGCG CGCTGGTCGC CGGTTCCCGG
TACCGCGGTG ACTTCGAAGA GCGGCTGAAG AAGGTGCTCA AGGAGATCCG CACCCGCGGC
GACATCATCC TGTTCATCGA CGAGATTCAC ACCCTCGTGG GTGCCGGTGC CGCCGAGGGC
GCCATCGACG CGGCGAGCAT CCTCAAGCCG ATGCTGGCCC GCGGTGAGCT CCAGACCATC
GGCGCCACCA CGCTGGACGA GTACCGCAAG CACCTGGAGA AGGACGCGGC GCTGGAGCGC
CGGTTCCAGC CGATCCAGGT CGCCGAGCCC TCGCTGTCGC ACACCATTGA GATCCTCAAG
GGCCTGCGCG ACCGCTACGA GGCTCACCAC CGGGTCTCGA TCACCGACGG CGCCCTGGTC
GCGGCGGCCA CCCTGGCCGA CCGCTACATC TCCGACCGGT TCCTGCCGGA CAAGGCGATC
GACCTCATCG ACGAGGCCGG GGCCCGGATG CGGATCCGTC GCATGACGGC GCCGCCGGAC
CTGCGCGAGT TCGACGAGCG CATCGCCCAG GCCCGCAAGG ACAAGGAGTC GGCGATCGAC
GCGCAGGACT TCGAGCGGGC CGCGCAGCTG CGCGACAACG AGAAGCAGCT GCAGGACCAG
CGCGAGAAGC GCGAGAAGGA GTGGAAGGCC GGCGACCTCG ACACCGTCAC GGAGGTCGAC
GACGAGATGA TCGCCGAGGT ATTGGCGAAC TGGACCGGTA TCCCCGTCTA CAAGCTGACC
GAGGAGGAGA CCTCCCGGCT GCTCAAGATG GAGGAGGAGC TGCACAAGCG CATCATCGGC
CAGCACGACG CCGTCAAGGC GGTCTCGCAG GCGATCCGCC GGACCCGCGC GGGTCTGAAG
GACCCGAAGC GTCCGTCCGG TTCGTTCATC TTCGCCGGTC CGTCCGGTGT CGGTAAGTCG
GAGCTGTCCA AGGCGCTGGC GGAGTTCCTG TTCGGTTCCG AGGACGCGCT CATCCAGCTG
GACATGAGCG AGTTCCACGA CCGGTACACG GTCTCGCGGC TCGTGGGTGC TCCTCCCGGA
TACGTCGGCT ACGACGAGGG CGGCCAGCTG ACCGAGAAGG TGCGGCGCAA GCCGTTCTCG
GTGGTGCTGT TCGACGAGAT CGAGAAGGCG CACTCCGAGG TGTTCAACAC GCTGTTGCAG
ATCCTCGAGG ACGGCCGCCT GACCGACGGT CAGGGCCGGA TCGTGGACTT CAAGAACACC
GTGCTGATCC TGACGACGAA CCTGGGCACC AAGGACGTCG CCAAGGCCGT CTCGCTCGGC
TTCCAGGCCG AGACCGGTGG CGAGGACGAC TACGAGCGGA TGAAGCTGAA GGTCAACGAC
GAGTTGAAGC AGCACTTCCG CCCCGAGTTC CTCAACCGGA TCGACGACAC GATCGTGTTC
CCGAAGCTGT CGGAGAACGA GATCATCAAG ATCGTCGACC TGATGGTCGC CCGGATCGAG
GAGCAGCTAA AGAACCGGGA CATGTCCATG GAGATCACCC AGGCGGCCAA GGAGTTCCTG
GGCCACAAGG GCTACGACCC GGTCCTGGGC GCCCGGCCGC TGCGCCGCAC GATCCAGCGC
GAGATCGAGG ACACGCTGTC GGAGAAGATC CTCTTCGACG AGCTGGTCCC CGGCCAGATC
GTGGTGGTCG ACTGCGAGGG CGACCCGGCC GACTTCGAGA ACGCGCACCT GACGTTCCGG
GGTTCGGACA AGCCCGCCGT CGAGGTCCCC GACGCCCCAC CGGTCGAACT GACCGCGGGC
AACGGCGACA GCGGCGACGC GAATCCGAAG AAGTCCGTGG AATAG
 
Protein sequence
MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEGVR 
QQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLIKLGAD LNRVRQQVLQ LLSGYQGKEP AGATAGGSAS GEQSQSSSPV LDQFGRNLTQ
AARDGKLDPV IGREKEIERV MQVLSRRSKN NPVLIGEPGV GKTAAVEGLA QAIVKGSVPE
TLKDKHLYTL DLGALVAGSR YRGDFEERLK KVLKEIRTRG DIILFIDEIH TLVGAGAAEG
AIDAASILKP MLARGELQTI GATTLDEYRK HLEKDAALER RFQPIQVAEP SLSHTIEILK
GLRDRYEAHH RVSITDGALV AAATLADRYI SDRFLPDKAI DLIDEAGARM RIRRMTAPPD
LREFDERIAQ ARKDKESAID AQDFERAAQL RDNEKQLQDQ REKREKEWKA GDLDTVTEVD
DEMIAEVLAN WTGIPVYKLT EEETSRLLKM EEELHKRIIG QHDAVKAVSQ AIRRTRAGLK
DPKRPSGSFI FAGPSGVGKS ELSKALAEFL FGSEDALIQL DMSEFHDRYT VSRLVGAPPG
YVGYDEGGQL TEKVRRKPFS VVLFDEIEKA HSEVFNTLLQ ILEDGRLTDG QGRIVDFKNT
VLILTTNLGT KDVAKAVSLG FQAETGGEDD YERMKLKVND ELKQHFRPEF LNRIDDTIVF
PKLSENEIIK IVDLMVARIE EQLKNRDMSM EITQAAKEFL GHKGYDPVLG ARPLRRTIQR
EIEDTLSEKI LFDELVPGQI VVVDCEGDPA DFENAHLTFR GSDKPAVEVP DAPPVELTAG
NGDSGDANPK KSVE