Gene Snas_6275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6275 
Symbol 
ID8887499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6618628 
End bp6620058 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID 
ProductTAP domain-containing protein 
Protein accessionYP_003514988 
Protein GI291303710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCA AACTCGTACT GATCAGTGCC CTGACAGCGG TTCTGGCCGC GGCGGTGGTG 
TACTCCGCCA ACGCTGGCGC GACCACATCA GAGGTGAACT GGAAACCCTG TGGCGACAAG
CCGGGCGCCG AATGCGGCAC CCTGGAGGTG CCGCGCGACT GGGACGATCC GGATTCGAAG
ACCGTCACCC TCAACCTCTC CCGACGTGTG GCCACCGACC CCGACAAGCG GGTCGGTGTG
CTGTTCTACA ACCCCGGCGG TCCCGGCCAG GGTGCCGCCG ACCTGGTTCG CGACTACGCG
GAGCAGAAGT TCTCGCCACG CTTGCGGGAA CGGTTCGACA TCGTCGGCAT CGACCCGCGC
GGGGTCGCGG GCAGCCAGGC CGTCAAGTGC GACAAGCCGG TGAACGACCC GAAGGTCAGC
CTGTTTCCCG ACAATGAGGA CGAATACCGG AAACTGTTGG CGCACAACAA GGAGGTGGCC
GACAGTTGCG ACGACCTGAT CGCCGACGTC GGCACCGACA ACGTGGCGCA GGACTTCGAC
GCGGTGCGCT CGGCCCTCGG CGAGGACTCC ATCACCTACT TCGGACAGTC CTACGGCAGC
ATGCTGGGAA CCGCTTACGC GCAACGGTTT CCGCAGCGGG TGCGGGCCAT GAGCCTGGAC
GGCGTCGTGG ACCACGGCAT GCCCTCGGAA CAGATGGTGA GCGAGGCGTC CAGCGCGGTC
GAGGAGTCGT TCGAGAGCTT CGCCGACTGG TGCGCGAAGA ACGAGAAGTG CGCGCTGCAC
GGCCGCGACG TCGGCGAGGT GTGGGACGCG ACGGTCGCGA AGGCCGAGGC GGAGCCGATC
CCGGTGCCCG GCAAGCGGGC GTTGACCGCC GAGGAGCTGC GGTTCGCCGC CTACGCGATG
CTGAACATGG TGCCGGAGTT CGGTTCCGAG CTCGGCAAGG CCATCGCGGC GGCCGAGAAA
GGCGACGGGA CCGCGTTCGC CGCGATCCGC GCCGAGGCCG AGAACCCGGC GACCTCAGCG
GCGTACCGCT CGATCCTGTG CATGGACATC GATCCCGGCG TCGACGGCTA CGACGAACTG
CGGGATCGGT TGGCGGACGC ACGGAAGCGG TCGCCGCACA TGGGCGGCAC CTCGGAGTTC
TGGAACATGA CGGCGGGCTG CCTGAACTGG CCGGTGCCGC CGAGCAATCC GCAGGGCCCC
ATCGACATCG ACGGGGTGCC GCCGACGCTG CTGGTCGGCA ACACCGGCGA CCCGGCGACG
CCGGTGGAGT GGGCCGAGTC GTTGTCCCAG GGCATCGAGG ACTCGCGAGT GCTGACCTAC
GACGGCACCG GGCACACCGC GTACCTGCGC TCCAAGTGCG TCACCGAGCG GGTGGACGAC
TACCTGGTGG ACGCGAAGCT GCCGAAGCCC GGCGAGGTGT GCCGGGAGTA G
 
Protein sequence
MKRKLVLISA LTAVLAAAVV YSANAGATTS EVNWKPCGDK PGAECGTLEV PRDWDDPDSK 
TVTLNLSRRV ATDPDKRVGV LFYNPGGPGQ GAADLVRDYA EQKFSPRLRE RFDIVGIDPR
GVAGSQAVKC DKPVNDPKVS LFPDNEDEYR KLLAHNKEVA DSCDDLIADV GTDNVAQDFD
AVRSALGEDS ITYFGQSYGS MLGTAYAQRF PQRVRAMSLD GVVDHGMPSE QMVSEASSAV
EESFESFADW CAKNEKCALH GRDVGEVWDA TVAKAEAEPI PVPGKRALTA EELRFAAYAM
LNMVPEFGSE LGKAIAAAEK GDGTAFAAIR AEAENPATSA AYRSILCMDI DPGVDGYDEL
RDRLADARKR SPHMGGTSEF WNMTAGCLNW PVPPSNPQGP IDIDGVPPTL LVGNTGDPAT
PVEWAESLSQ GIEDSRVLTY DGTGHTAYLR SKCVTERVDD YLVDAKLPKP GEVCRE