Gene Snas_6170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6170 
Symbol 
ID8887392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6528044 
End bp6529312 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content70% 
IMG OID 
Productseryl-tRNA synthetase 
Protein accessionYP_003514886 
Protein GI291303608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGC TCGTGATTGA CCTGCGAACC GTGCGAGAGA ACCCCGACCT GATCCGCCGC 
AGCCAGCAGG TGCGCGGCGA GTCCGAGCAG GTCGTGGACG ATCTCATCGC CGCCGACACC
GCGAACCGCG AGGCCCTGGC CCGCTTCGAG ACGCTGCGCG CCGAGCAGAA GCAGCTGGGC
AAGCGGGTGT CGCGCGCCTC CGGGGACGAG AAGCAGGAGC TGCTCGTCCG CACCAAGGAG
CTGTCGGGCG AGGTCAAGAC CGCCGAGGCC GCGGTGAACG CCGCCGCCGA GACGCTGCGG
GCCGCGCAGC TGGCGGTGCC CAACATCGTC GAGGAGGGCG TGCCCGCCGG CGGCGAGGAC
GACTTCGTCG TGCTGCGCGA GGTGGGGGAG CGCAAGGTCC CCGAGACCTG CCGCGACCAC
CTGGAGCTGG GCGAGATCCT GGGCGCCATC GACATGGAAC GCGGCGCCAA GACCTCGGGC
TCGCGGTTCT ACTACCTGGT CGGCATGGGC GCGCTGCTAC AGCAGGCGCT GCTCAACCTG
GCGCTCCAGC AGGCCGTCGA GACCGGCTTC ACGCCGATGA TCCCGCCGGT CATGGTGCGG
CCCGAAGCCA TGGAGGGCAC CGGTTTCCTG GGCGCCCACG CCTCGGAGGT CTACTACCTC
GAGGACGAGG AGCTGTACCT GGTCGGCACC TCGGAGGTGC CGCTGGCCTC GTACCACGCC
AAGGAGATCC TCGACCTGGA ACAGCCGAAG CGCTACGCCG CCTGGTCGTC GTGCTTCCGC
AAGGAGGCCG GCAGCTACGG CAAGGACACC CGGGGCATCA TCCGGGTGCA CCAGTTCGAC
AAGATCGAGA TGTTCTCGTA CTGCCGTCCC GAGGAGGCCG CCGCCGAACA CGAGCGGTTG
CTGGGCTTCG AGGAGCGGAT GCTGGCCAAG ATCGAGGTGC CCTACCGGGT CATCGACACC
GCCGGTGGCG ACCTGGGTTC CTCGGCGGCC CGCAAGTTCG ACTGCGAGGC CTGGATCCCG
AGCCAGGAAC GCTACCGCGA GCTGACATCC ACATCGAACT GCGGCACCTT CCAGGCGCGG
CGGCTCGGTA CCCGCTACCG CGACGAGAAC GGCAAGCCGC AGACCGCCGC GACCCTCAAC
GGCACGCTGG CCACCACCCG CTGGATCGTG GCGATCCTGG AGAACCACCA GCAGCCCGAC
GGTTCGGTGC GCGTGCCCGA GGCGCTGCGG CCGTTCCTGG GCCGCGAGGT CCTCGAGCCC
GTCTCGTGA
 
Protein sequence
MSVLVIDLRT VRENPDLIRR SQQVRGESEQ VVDDLIAADT ANREALARFE TLRAEQKQLG 
KRVSRASGDE KQELLVRTKE LSGEVKTAEA AVNAAAETLR AAQLAVPNIV EEGVPAGGED
DFVVLREVGE RKVPETCRDH LELGEILGAI DMERGAKTSG SRFYYLVGMG ALLQQALLNL
ALQQAVETGF TPMIPPVMVR PEAMEGTGFL GAHASEVYYL EDEELYLVGT SEVPLASYHA
KEILDLEQPK RYAAWSSCFR KEAGSYGKDT RGIIRVHQFD KIEMFSYCRP EEAAAEHERL
LGFEERMLAK IEVPYRVIDT AGGDLGSSAA RKFDCEAWIP SQERYRELTS TSNCGTFQAR
RLGTRYRDEN GKPQTAATLN GTLATTRWIV AILENHQQPD GSVRVPEALR PFLGREVLEP
VS