Gene Snas_6146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6146 
Symbol 
ID8887368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6504330 
End bp6506402 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content73% 
IMG OID 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_003514862 
Protein GI291303584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGG CGCTGTATCG CAAGTACCGT CCGCAGAGCT TCGCCGAGGT CATCGGGCAG 
GAGCACGTCA CCGAACCCCT GATCTCGGCG ATCAGCAACG GGCGGCTCAA CCACGCGTAC
CTCTTCTCCG GGCCGCGCGG CTGCGGCAAG ACCTCCAGCG CCCGGATCCT GGCCCGCTCG
CTGAACTGCG CCAAGGGTCC GACGCCGACG CCGTGCGGGG AGTGCGACTC GTGCGTCGGG
CTGTCGGCGG GCGGCGGCGG GTCGATCGAC GTGATCGAGA TCGACGCGGC CAGCCACGGC
GGCGTCGACG ACGCCCGGGA GCTGCGGGAA CGCGCGGTCT TCGCGCCGGT GAACTCGCGG
TACAAGATCT ACGTCATCGA CGAGGCGCAC ATGGTGTCCT CGGCGGGGTT CAACGCGCTG
CTGAAGCTGG TCGAGGAACC GCCGGACTAC GTCATGTTCG TCTTCGCCAC CACCGAACCG
GAGAAGGTGC TGCCGACGAT CCGGTCGCGC ACGCACCACT ACCCGTTCCG GCTGATTCCG
CCCGCCGCGA TGCGGGGGCT GTGCGAGAAG CTGTGCCACG AGGAGGGCAT CACCGTCGAG
GAGTCGGTGT ACCCGTTGGT GATCCGCGCG GGCGCCGGTT CGGCGCGGGA CACGCTGTCG
GTGCTGGACC AGCTGATCGC GGGCGCCGGG GACGAGGGCG TCACCTACGC GCGGGCGATG
GCGCTTTTGG GCGTCACCGA CGGTTCGCTG CTTGACGAGA TCTGCGAGGC CCTGTCGGCG
ATGGACGGCG CCGGGGCGAT AGGCGTGATC GACAAGGCGC TGGAGGCCGG GCACGACCCG
CGCCGCTTCG CCGCCGACCT GCTGGAGCGG CTGCGCGACC TCATCGTGCT CAACCAGGTC
CCCGACGCGG GATCGACGGG GCTCATCGAC GTACCGTCCG AAGTGCTGGA ACGCATGACG
GGCCAGGCGA TCCGGATGGG AACCCCGACC CTGACCCGGA TGGCCGAGAT CGTCCACAGT
GCTCTTTCGG CGATGCGGGG GACGACGGCT CCCCGGCTGC TGCTGGAACT GGCGATGGCG
CGCTCGGTGC TGCCGTCGGT CGACGACTCG GCGGCGGGCC TGTTGCAGCG CATCGACCAG
CTGGAGCGTC GGATGGCCGA GGGGGTGCCG ATGGCGGCAC CCGCCGCCGC CGCGCCACCC
GCTCCGGCCG CCGCTGCCGC CGCGAGCCAA CCGGTTCCGC CGAGCGCCGG AACGTCGGGC
CGCGAGGCCG CCAAGGCCGC AGCCGCCCAG GCGGCGGGCA ACGCGCCTTC GCCTGCGGCG
CAAGGCGACC AGCCCGCTGA CCGCGCGAGC TCAGCCGGAC AGCCGGCAGC TGCGGCTCCG
TCGCAAGCCG AGGCGAGCGC GGCTACCGAT GCCGCCCCGC CATCGCCGGC GGACGCCGGA
GGCTCAGCCC AGGCTGGCCC CGCGACCGCA CCGCCAGCCG GTCAGTCGGC ACGCGCCGCC
GCACAGGACA GCTGGGCGAC CGAACCAGCC GCTCCCGCCC CGCAGGCCGC ACCCGCCGCT
GCCCCACCGG CCGCCGGTGG CGACAAGCTG GCCCAGGTTC GCGGCAGCTG GGAGCAGATC
AAGCAGGCCG TCAAGGACCG CAAGAAGACC GTGGCCGCGT TCCTCATGGA GGCCACGGTC
ACCGGCGTGG ACAACGACAC CCTCGTCCTG ACCTTTCGCC ACGCCTTCCA CGCCAACGCC
CTCACCAGCG ACAGCGCGCT GCCGATCTTC ACCGAAGCGT TGAAGTCGGT GCTGGGCGGT
TCCTGGCGGG TGCGGTGCGA GGTCAACGAG GCCGGGGCCG CTCCCCCGCC GCCGCCCGCC
CGTCCGGCGA GCCCGCCACC GCCCGCCGCG GCCCCGCCGC CGCAGGCTCC CGCGCCCCGG
CCCGAGCCGG GTCCGCCGGT CGACTACGAG TCCGAGGAAC CGCCGGGGCC CGAACCCGAC
TTCGACCCAC CGCCCGCCGC CGCTGGCGGC TCGGTCACCA TGGAGCAGGC GGTCGAGATG
TTCGAAAAGA AGGTGGGCGC CAAGAAGCTC TAG
 
Protein sequence
MTLALYRKYR PQSFAEVIGQ EHVTEPLISA ISNGRLNHAY LFSGPRGCGK TSSARILARS 
LNCAKGPTPT PCGECDSCVG LSAGGGGSID VIEIDAASHG GVDDARELRE RAVFAPVNSR
YKIYVIDEAH MVSSAGFNAL LKLVEEPPDY VMFVFATTEP EKVLPTIRSR THHYPFRLIP
PAAMRGLCEK LCHEEGITVE ESVYPLVIRA GAGSARDTLS VLDQLIAGAG DEGVTYARAM
ALLGVTDGSL LDEICEALSA MDGAGAIGVI DKALEAGHDP RRFAADLLER LRDLIVLNQV
PDAGSTGLID VPSEVLERMT GQAIRMGTPT LTRMAEIVHS ALSAMRGTTA PRLLLELAMA
RSVLPSVDDS AAGLLQRIDQ LERRMAEGVP MAAPAAAAPP APAAAAAASQ PVPPSAGTSG
REAAKAAAAQ AAGNAPSPAA QGDQPADRAS SAGQPAAAAP SQAEASAATD AAPPSPADAG
GSAQAGPATA PPAGQSARAA AQDSWATEPA APAPQAAPAA APPAAGGDKL AQVRGSWEQI
KQAVKDRKKT VAAFLMEATV TGVDNDTLVL TFRHAFHANA LTSDSALPIF TEALKSVLGG
SWRVRCEVNE AGAAPPPPPA RPASPPPPAA APPPQAPAPR PEPGPPVDYE SEEPPGPEPD
FDPPPAAAGG SVTMEQAVEM FEKKVGAKKL