Gene Snas_6077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6077 
Symbol 
ID8887298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6433670 
End bp6434893 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514794 
Protein GI291303516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACAG GCCACAGTTC TGCTTCTGGA AGTATTCTGC GTCAGCCCGC GTCGGTGTGG 
GCCACCGCTT TTGCCGCCGT GGTCGCGTTC ATGGGGATCG GGTTGGTGGA CCCGATTCTG
CCGTCCATCG CTGAGGGGTT GGACGCCACT CCGAGTCAGG TGTCGTTGCT GTTCACCAGT
TATTTTCTGG TGACCGCTGT GGCGATGTTG GTTACGGGGT GGATCTCGAG TCGGATTGGC
GGGAAGAAGA CACTCCTTAT TGGATTGGCG ATCGTGGTGG TGTTCGCGAC GTTGTCGGGT
ACTTCGGACA CGGTGGGGCA GTTGGTCGGG TTCCGAGCTG GGTGGGGTTT GGGTAACGCT
GTTTTTGTGG CCACCGCGTT GGCCGTCATC GTTGGTGCCG CTTCGGGTGG GGCCGAAGCC
GCGATCTTGC TCTACGAGGC CGCGTTGGGG CTTGGTATTT CGATGGGGCC GCTGGTTGGT
GCGCTGCTGG GTGACTGGCA TTGGCGGTAT CCGTTTTTCG GTACCGCCGC GTTGATGGCC
GTTGGTTTTG TGCTCATCAC CGTGTTGTTG AAGCGGGAGA GCGCGGGGAG GGCCAGGACT
CGGTTGTCCG ATCCGTTGCG GGCGCTGTTG CATGGTGGAC TGTCTACAAC GGCGGGTGCG
GCGGTGTTCT ACAACTTCGC GTTCTTCACC GTGTTGGCGT ACACCCCGTT TGTGTTGGGC
ATGTCGGCTT ATGGGATCGG TGCGGTGTTC TTTGGCTGGG GTGTCGCCGT CGCTGTTAGT
TCGGTGTTCT TGGCTCCCGT GATGCAGCGG CGTTTTGGGT CGGTGCGCAC CATGTACTTG
GCGTTGGGAT TCTTGTTGGT GAGCCAGGTG GGGATCGCGT TGTCCGGGGC TGCCGGGGTC
ATCGGGTTCA CCGTCGCTAC GGGGTTGGCG ATTGGGGTCA ACAACACCGT GTTCACCGAG
GCCGCCATGG AGGTGTCGGA CGCGCCGCGC GCGGTGGCTT CCGCCGGGTA CAACTTCGTG
CGGTGGTTGG GCGCGGCGTT GGCGCCGTTC GTGGCCAGCA AGCTGGGGGA GGAGTTCTCG
CCGTCGGTGC CGTACTTCGT GGGCGCGGCC TGTTGTGCGG CCGCGATTGT GGTGTTGGTG
GCGCGTCGCA GGCACCTGTC GTCACTGGAT GAGGTGGACG CCGATCACGA CTTCCATGAT
CGGGAGGTTG TTCCCGCGCG TTAG
 
Protein sequence
MSTGHSSASG SILRQPASVW ATAFAAVVAF MGIGLVDPIL PSIAEGLDAT PSQVSLLFTS 
YFLVTAVAML VTGWISSRIG GKKTLLIGLA IVVVFATLSG TSDTVGQLVG FRAGWGLGNA
VFVATALAVI VGAASGGAEA AILLYEAALG LGISMGPLVG ALLGDWHWRY PFFGTAALMA
VGFVLITVLL KRESAGRART RLSDPLRALL HGGLSTTAGA AVFYNFAFFT VLAYTPFVLG
MSAYGIGAVF FGWGVAVAVS SVFLAPVMQR RFGSVRTMYL ALGFLLVSQV GIALSGAAGV
IGFTVATGLA IGVNNTVFTE AAMEVSDAPR AVASAGYNFV RWLGAALAPF VASKLGEEFS
PSVPYFVGAA CCAAAIVVLV ARRRHLSSLD EVDADHDFHD REVVPAR