Gene Snas_5981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5981 
Symbol 
ID8887202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6336139 
End bp6337221 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGlu/Leu/Phe/Val dehydrogenase dimerization region 
Protein accessionYP_003514700 
Protein GI291303422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.245391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTAT TCGAAGCCCC CGAGAACCTG ACCGGGCACG AACAGGTCGT CTTCTGCCAG 
GACAAACCAT CCGGCCTCAA GGCCATCATC GCGGTGTACT CCACCGCCCT GGGCCCGGCA
CTTGGCGGCA CCCGGTTCTA CCCCTACGCG TCGGAGGAAG AAGCCGTCCA CGACGCCCTC
GACCTCTCCA AGGGCATGGC ATACAAGAAC TCCCTCGCGG GCCTGGACCT CGGCGGCGGC
AAGGCCGTCA TCTGGGGCGA CCCCGAGACC GACAAGTCCG AGGCGCTGCT GCGCGCCTAC
GGGCGCTTCG TGGAGTCGCT GAACGGGCGT TACATCACCG CCTGCGACGT CGGAACCTAC
GTGCACGACA TGGACATCGT CGCCAAGGAG ACCCGTCACG CCACCGGCCG CTCGGTCGAG
AACGGCGGCG CCGGCGACTC CTCGGTGCTG ACCGCCTACG GCGTCTTCTG CGGCATGCGC
GCCGCCGCCC AGCACCGCTA CGGCACCGCC GACCTGACCG GCCGCACCGT CGGCGTCGCC
GGGATCGGCA AGGTCGGACG GCACCTGGTG ACGCACCTCA TCGAGGCCGG TGCCCAGGTC
GTGGCCACCG ACGTCAGTGA GAAGGCCCAC GACTGGCTGT CCGCCAACCA CCCGCAGGCC
AGCTTCGTCG ACTCCACCGA GAAGCTGATC GCCTCCGACA TCGACATCTA CGCGCCCTGC
GCCCTGGGCG GCGCCCTCAA CGACGACTCG GTGGCGGCGC TGCGCGCCAA GATCGTGGTC
GGCGCGGCCA ACAACCAGCT GGCCCACCCC GGCGTCGAGA AGCTGCTCGC CGATCGCGGC
ATCCTTTACG CCCCCGACTA TCTGGTCAAC TCCGGCGGCG TGATCCAGGT CGCCGACGAG
ATCCACGGCT TCAACTTCGA CCGCGCCAAG CGCCGCGCGT CCAAGATCTT CGACATCACC
GGACAGATAT TGCGCACCGC CGACACCGAG GGAGTCCCCC CGGCGGTGGC GGCCGACCGA
CTGGCCGAAC GCCGGATGGC CGAGTGCGGT CGGTTGCGGA GCATTCACCT GCCCCAGTCA
TAG
 
Protein sequence
MGVFEAPENL TGHEQVVFCQ DKPSGLKAII AVYSTALGPA LGGTRFYPYA SEEEAVHDAL 
DLSKGMAYKN SLAGLDLGGG KAVIWGDPET DKSEALLRAY GRFVESLNGR YITACDVGTY
VHDMDIVAKE TRHATGRSVE NGGAGDSSVL TAYGVFCGMR AAAQHRYGTA DLTGRTVGVA
GIGKVGRHLV THLIEAGAQV VATDVSEKAH DWLSANHPQA SFVDSTEKLI ASDIDIYAPC
ALGGALNDDS VAALRAKIVV GAANNQLAHP GVEKLLADRG ILYAPDYLVN SGGVIQVADE
IHGFNFDRAK RRASKIFDIT GQILRTADTE GVPPAVAADR LAERRMAECG RLRSIHLPQS