Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5939 |
Symbol | |
ID | 8887160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6300533 |
End bp | 6301189 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003514659 |
Protein GI | 291303381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTAC TGGTGGTCGA GGACGAGCCG ATGCTCGCCG AGGCGATCGC GGAGTGGCTG CGGGCCGAGC CGCACGCGGT CGACATCGCG TTGGACGGCG CCGCCGCGCT GGAACGGGTC TGGGTCAACG ACTACGACGT CCTGGTGCTG GATCGCGACA TTCCCCGGGT GCACGGCGAC GAGGTGTGCC GCCAGGTCGT CGACTCCGAG TCCGAGGTCC GGATCCTCAT GCTGACCGCC GCCGCCGAGA TCGGTGACCG GGTCGACGGC CTGTCGCTGG GGGCCGACGA CTACCTGACC AAACCGTTCG CGTTCCCCGA ACTGGCGGCC CGGGTGCACG CCCTGGGCCG CCGCTCCCGC CCGGCCGCGC CGCCGGTGCT GCGCCGGGCC GGGATAACCG TCGACACGGC CCGCCGCCAG GTGTTCCGGG ACGGCCGCTA CATCCCACTG TCCAAGAAGG AGTTCGCGGT GCTGACGGAG TTGGTGCGCG GTGACGGCGA GGTCGTCTCG GCCGAACAGC TGTTGGAGAA GGCATGGGAC GAGCACGTCG ACCCGTTCAC GGGCGTGGTG CGGCTGACCA TCCTCAAGGT ACGGCGCAAG CTCGGTGAGC CTCAGATCAT CGAGACGGTT CCGGGAGTGG GGTACCGGAT CCCATGA
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Protein sequence | MRVLVVEDEP MLAEAIAEWL RAEPHAVDIA LDGAAALERV WVNDYDVLVL DRDIPRVHGD EVCRQVVDSE SEVRILMLTA AAEIGDRVDG LSLGADDYLT KPFAFPELAA RVHALGRRSR PAAPPVLRRA GITVDTARRQ VFRDGRYIPL SKKEFAVLTE LVRGDGEVVS AEQLLEKAWD EHVDPFTGVV RLTILKVRRK LGEPQIIETV PGVGYRIP
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