Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5938 |
Symbol | |
ID | 8887159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6299334 |
End bp | 6300536 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003514658 |
Protein GI | 291303380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCC GTAAGCCACG TCCGACGCTG CGCCTGCGGC TGACCCTTGT GTACGGTGTC ATGTTCTTCA TCGCCGGGCT GCTGCTGCTC GGTGTCACCT ACATGCTGTT CCAGGAGCAG GTCGCGAACA ACAAGTACCT CATCACCATG GGGCAGAAGC CAACCCCGGA ATCCGACGGC GAGGAGTCGA CGGCGGCCCT TGACACCGAG GTCAAACAAG AGGACATCCC CGACTGGGCG CTGCAGGGGG GCAGGGAGCT GCGGCAGGCC GCCGCCACCT CGCTGTTGAC CTACGGTTCG GTGTCGCTGC TGGTGGTGGG CGGCGCCGCG GCCGGGTTCG GCTGGCTGGT GTCGGGACGG ATGCTGGCCC CGCTGCGCCA GGTCACCGAG ACCGCGCACC GCATCGCCGG AGCCCCGGGC GCCGACGGCG GCCTGCACGA ACGCATCGCG CTGACCGGAC CGGACGACGA GGTCAAGGAA CTGGCCGACA GTTTCGACTC CATGGTGGAG CGACTGGACC GCTCCTTCGC CGGGCAGCGC CGGTTCGTCG CCAACGCCTC CCACGAACTG CGCACCCCGC TGACCCTCAA CCGGGCGCTG GTCGAGCTGG CCATGCACCG GGAATCGGCG TCGGCGGACG TGAAGCGACT GGGCACCGAT CTGCTGGCCA TCAACGCCCG TCACGAGAAG CTCATCGCCG GGCTGCTGCT GTTGGCCCGT TCCGAGCACG AGCTGGCCGA GCGCGCTTCC GTCGACCTGG CCGACATCGT GTCCCAGGTG GTGGCGCAGC AGTCGGGGCA CGCCGAGACC GCCGGTGTCA CCATCACCGA GAAGGCCGAG GCGGCACCGA CCACAGGGGA CGCGATGCTG CTGGAACGTC TGGTGCACAA CCTGGTCGAG AACGCCGTCC GCTACAACCT CGACGACGGC ACCGGCCGGG TGCTGGTGGA GAGCCGCACC GTCGCCGACC GGGTGGAGGT GGTGGTCGTC AACGCCGGGC CCGACATCGC GTCCTACGAC GTGCCCGCCC TGTTCGAACC GTTCCGGCGG TTGGGGGGCG ACCGGGTGGT GACCGCCAAG GGCGCCGGAC TGGGACTGTC CATCGCCCGC TCGGTGGCGC GCGCCCACCG CGGCGAGGTC ACGGCCAGTC CGAATCCCGA CGGCGGTCTG ACGGTGACGG TGAACCTGCC GCGAGAATCG TGA
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Protein sequence | MRIRKPRPTL RLRLTLVYGV MFFIAGLLLL GVTYMLFQEQ VANNKYLITM GQKPTPESDG EESTAALDTE VKQEDIPDWA LQGGRELRQA AATSLLTYGS VSLLVVGGAA AGFGWLVSGR MLAPLRQVTE TAHRIAGAPG ADGGLHERIA LTGPDDEVKE LADSFDSMVE RLDRSFAGQR RFVANASHEL RTPLTLNRAL VELAMHRESA SADVKRLGTD LLAINARHEK LIAGLLLLAR SEHELAERAS VDLADIVSQV VAQQSGHAET AGVTITEKAE AAPTTGDAML LERLVHNLVE NAVRYNLDDG TGRVLVESRT VADRVEVVVV NAGPDIASYD VPALFEPFRR LGGDRVVTAK GAGLGLSIAR SVARAHRGEV TASPNPDGGL TVTVNLPRES
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