Gene Snas_5938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5938 
Symbol 
ID8887159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6299334 
End bp6300536 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003514658 
Protein GI291303380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCC GTAAGCCACG TCCGACGCTG CGCCTGCGGC TGACCCTTGT GTACGGTGTC 
ATGTTCTTCA TCGCCGGGCT GCTGCTGCTC GGTGTCACCT ACATGCTGTT CCAGGAGCAG
GTCGCGAACA ACAAGTACCT CATCACCATG GGGCAGAAGC CAACCCCGGA ATCCGACGGC
GAGGAGTCGA CGGCGGCCCT TGACACCGAG GTCAAACAAG AGGACATCCC CGACTGGGCG
CTGCAGGGGG GCAGGGAGCT GCGGCAGGCC GCCGCCACCT CGCTGTTGAC CTACGGTTCG
GTGTCGCTGC TGGTGGTGGG CGGCGCCGCG GCCGGGTTCG GCTGGCTGGT GTCGGGACGG
ATGCTGGCCC CGCTGCGCCA GGTCACCGAG ACCGCGCACC GCATCGCCGG AGCCCCGGGC
GCCGACGGCG GCCTGCACGA ACGCATCGCG CTGACCGGAC CGGACGACGA GGTCAAGGAA
CTGGCCGACA GTTTCGACTC CATGGTGGAG CGACTGGACC GCTCCTTCGC CGGGCAGCGC
CGGTTCGTCG CCAACGCCTC CCACGAACTG CGCACCCCGC TGACCCTCAA CCGGGCGCTG
GTCGAGCTGG CCATGCACCG GGAATCGGCG TCGGCGGACG TGAAGCGACT GGGCACCGAT
CTGCTGGCCA TCAACGCCCG TCACGAGAAG CTCATCGCCG GGCTGCTGCT GTTGGCCCGT
TCCGAGCACG AGCTGGCCGA GCGCGCTTCC GTCGACCTGG CCGACATCGT GTCCCAGGTG
GTGGCGCAGC AGTCGGGGCA CGCCGAGACC GCCGGTGTCA CCATCACCGA GAAGGCCGAG
GCGGCACCGA CCACAGGGGA CGCGATGCTG CTGGAACGTC TGGTGCACAA CCTGGTCGAG
AACGCCGTCC GCTACAACCT CGACGACGGC ACCGGCCGGG TGCTGGTGGA GAGCCGCACC
GTCGCCGACC GGGTGGAGGT GGTGGTCGTC AACGCCGGGC CCGACATCGC GTCCTACGAC
GTGCCCGCCC TGTTCGAACC GTTCCGGCGG TTGGGGGGCG ACCGGGTGGT GACCGCCAAG
GGCGCCGGAC TGGGACTGTC CATCGCCCGC TCGGTGGCGC GCGCCCACCG CGGCGAGGTC
ACGGCCAGTC CGAATCCCGA CGGCGGTCTG ACGGTGACGG TGAACCTGCC GCGAGAATCG
TGA
 
Protein sequence
MRIRKPRPTL RLRLTLVYGV MFFIAGLLLL GVTYMLFQEQ VANNKYLITM GQKPTPESDG 
EESTAALDTE VKQEDIPDWA LQGGRELRQA AATSLLTYGS VSLLVVGGAA AGFGWLVSGR
MLAPLRQVTE TAHRIAGAPG ADGGLHERIA LTGPDDEVKE LADSFDSMVE RLDRSFAGQR
RFVANASHEL RTPLTLNRAL VELAMHRESA SADVKRLGTD LLAINARHEK LIAGLLLLAR
SEHELAERAS VDLADIVSQV VAQQSGHAET AGVTITEKAE AAPTTGDAML LERLVHNLVE
NAVRYNLDDG TGRVLVESRT VADRVEVVVV NAGPDIASYD VPALFEPFRR LGGDRVVTAK
GAGLGLSIAR SVARAHRGEV TASPNPDGGL TVTVNLPRES