Gene Snas_5920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5920 
Symbol 
ID8887139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6282489 
End bp6283085 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003514641 
Protein GI291303363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAGC TGGCGGTGCT GGGTCTGCTG CATGACTCCC CCATGCACGG CTACGAACTC 
CGCAAGCGAC TGACCACGCT GCTGGGGGCC TTTCGCGCCA CCTTCAGCTA CGGCTCGCTG
TACCCGACGC TGCGCAAGAT GCGCGAGCGC GGCTGGATCG TGGAGGACGC CCCGGCTCCG
GCGGGCGAGG CCCCGCCCCT GACCGGCCGC CGCGGCCGCA TCTCCTACCG CCTCACCCCG
GAGGGCAAGG AACGGTTCGC CGAACTCATA GCCACCGCCT GCCCCGAAGC CTTCGAGGAC
ACCGGTTTCG GCGTTCACTT CGCCTTCTTC TCGCGCTGTG AGCCCGCCGT GCGACTGCGG
GTCCTCGAGG GACGCCGCCG CCGGGTCGAG GAGCGCCGGG AGACCCTGCG CGACACCGTC
GACCGCGCCA CCGAACGTCT GGACGCCTAT TCGCTCGAAC TACAGCGTCA CGGCCTGGAA
GCCTGCGAAC GCGAAGTCCG CTGGCTCAAC GAGATCATCG CCTCCGAGCA GGCCGGACGG
CCACCGTCCG TCTCGTTCGG GGACGACACC AACGAAACAC CTGATTCATC GAAATAG
 
Protein sequence
MLELAVLGLL HDSPMHGYEL RKRLTTLLGA FRATFSYGSL YPTLRKMRER GWIVEDAPAP 
AGEAPPLTGR RGRISYRLTP EGKERFAELI ATACPEAFED TGFGVHFAFF SRCEPAVRLR
VLEGRRRRVE ERRETLRDTV DRATERLDAY SLELQRHGLE ACEREVRWLN EIIASEQAGR
PPSVSFGDDT NETPDSSK