Gene Snas_5884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5884 
Symbol 
ID8887100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6243496 
End bp6244626 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514605 
Protein GI291303327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAT CGTTGGAGCA GGCGTTGGCC GAGATCCGCG GCCTGCTGGC CGAGCGGCAC 
AAGCTGGTGC GCGCCGTGGC CTCGGGCCGC CGCCGCAACG AACGGCCCGC GCACGTCAAA
ACCGAGCTGC GGCCGGTGGC GGTCAAGGGC GGCGTGAAGC TCCAGATCTC GCAGCACGAC
GGCCAGCGGC CCCTGGTGAC CAATGTCGAC GGAGACGAGG CCGACAAGCG CGTCGACGAC
GTGCTGGCCG AGCCCTACGG CAACTGGCTG GTCGAGACCA CCGAGGCCAC CGTCCAGCTG
CGGGTCACCA AACGCGGTGA CGCGCAGGTG CACCGGGCCG CCGCGTCCCG GGACCGGGAC
CTGGCCCACG ACCGCACCCC GCCGCACCTC ATCGCCCCCG ACGACCCGCT GTTTCGGGAA
CTGGGCGCGG GCGCGGCGAA ACGGCGGCAG GTGGACGCGT TCCTGCGGGC CGTGGCGTCG
CTGTTGGGCG ACGGCGCCGC CGTGGAACAC GTCGTCGATC TGGGCTGCGG CAACGCCTAC
CTGACCTTCG CCACGCACCG CTACCTGAAC CTCGCCGGAG CCGACCCCCG GGTGACCGGC
GTCGACGTGC GCGAGGACCA GCGGCACCGC AACACCGAGC TGGCCCAGAA GCTGGGCGTC
GGCGAGCGGG TCCGGTTCAT CGCCGGAACC GCCGCCGAGA CCCCGCTGGA CGATGTGGAC
ATGGTGCTGG CGCTGCACGC CTGCGACACC GCGACCGACG ACGCGCTCGC GCGCGGGGTC
TCCTTGGGCG CCAAGCACAT CGTCGCCGCG CCGTGTTGCC ACCACGATCT GGCCGCGCAG
CTGCGCAAGG CCGCCGCCCC GTCCCCGTAC GGTCAGCTCA CCGCCGACGG CATCCTGCGG
GAACGGTTCG CCGACGTGCT CACCGACGCG CTGCGCGCGA CGCTGCTGCG CGCCCACGGG
TACAGGGTGG ACGTCATCGA GTTCATCGAT TCGGCGCACA CGCCCCGCAA CACGCTGCTG
CGCGCCACCC GCTCGACCGC GACACCGGAT CCACGGCACG CCGAGGAGTT CCGGCAGCTC
ACTTCACAGT GGAATATCCG GCCGTACCTG GCCGACCTGC TCACACCGTG A
 
Protein sequence
MTESLEQALA EIRGLLAERH KLVRAVASGR RRNERPAHVK TELRPVAVKG GVKLQISQHD 
GQRPLVTNVD GDEADKRVDD VLAEPYGNWL VETTEATVQL RVTKRGDAQV HRAAASRDRD
LAHDRTPPHL IAPDDPLFRE LGAGAAKRRQ VDAFLRAVAS LLGDGAAVEH VVDLGCGNAY
LTFATHRYLN LAGADPRVTG VDVREDQRHR NTELAQKLGV GERVRFIAGT AAETPLDDVD
MVLALHACDT ATDDALARGV SLGAKHIVAA PCCHHDLAAQ LRKAAAPSPY GQLTADGILR
ERFADVLTDA LRATLLRAHG YRVDVIEFID SAHTPRNTLL RATRSTATPD PRHAEEFRQL
TSQWNIRPYL ADLLTP