Gene Snas_5844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5844 
Symbol 
ID8887060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6209655 
End bp6210431 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003514566 
Protein GI291303288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GATTCACCGG ATATGTCGCC CTCGGTGACA GTTTCACCGA AGGCATGAAC 
GACCACGGCG GTGACGGCAT CTTCCGTGGC TGGGCCGACC TGGCCGCGAC CCGGATGGCC
GAGGCCGACC CGGAGCTGAA GTACGCCAAT CTGGCGATTC GCGGCAAGCT GTTCGACGAG
GTCGTCGACG AGCAGGTGCC CGCCGCGCTG CGGCTGCGTC CCGACCTGGT CAGTTTCGTC
GCCGGTGGCA ATGACGCGCT GCGCACCAGC TTCGACCCGG CCCGGATGGC CGGCCGGTTC
CACGAGGCGA TCCGGGTGCT GACCGCGTCC GGCGCCCGGG TGCTGATGAG TACCGGCTTC
CACCCGCCGC GGCTGCCCGC GCACCGGTTG CTGCGCAAGC GGATCGTCGC CCTCAACGAG
ATCATCCGCA AGGTCGCCAA ACGCCACGAC GCCGCCCTGG TCGACCTGTT CGCCGACGAG
GCCTTCGCCG ACACCCGGAT GTGGAGCGAG GACCGGCTGC ACATGTCGGC GCTCGGCCAC
CGGCGGGTCG CCCACCATGT GTGTCAGGCT CTGAGTGTGG ACCCGGACCC GAAGTGGAGC
GCGCCGCTGC CGACCGCGCC CGGCAAGAGT TGGCTGCGCC GCCGCCGCGA GGACGCCGCC
TGGACCCGCG AGCACGCGCT GCCCTGGGTG CAGCGCCGGT TCACCGGACA GTCGTCCGGT
GACATGATCA CGCCCAAACG CCCGCAGCTG ATGCCGGTGA GCCAGGTCGG TTCCTAG
 
Protein sequence
MAERFTGYVA LGDSFTEGMN DHGGDGIFRG WADLAATRMA EADPELKYAN LAIRGKLFDE 
VVDEQVPAAL RLRPDLVSFV AGGNDALRTS FDPARMAGRF HEAIRVLTAS GARVLMSTGF
HPPRLPAHRL LRKRIVALNE IIRKVAKRHD AALVDLFADE AFADTRMWSE DRLHMSALGH
RRVAHHVCQA LSVDPDPKWS APLPTAPGKS WLRRRREDAA WTREHALPWV QRRFTGQSSG
DMITPKRPQL MPVSQVGS