Gene Snas_5837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5837 
Symbol 
ID8887053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6202898 
End bp6205099 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content71% 
IMG OID 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003514560 
Protein GI291303282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG ACACCGAGAA CATCATCGAA CTGAACATCG GCGGCATGAC CTGCGCGTCG 
TGTGCCAACC GGATCGAGAA GAAGCTCAAC CGGATGGACG GCGTGACCGC GACCGTCAAC
TACGCCACCG AGAAGGCCAC CGCCACCGTG CCCGACGGCG TCGCCGCCGC CGACCTGATC
GCCGTGGTCG AGAAGACCGG CTACACCGCG CAGCCCAAGG CCGAGGTCGA AGAACCCGAC
GCCGACGCCG AACTCGACGG ACTGCGCTAC CGGGTGATCC TGTCGCTGGC CCTGGCGCTT
CCCGTCGTCG CGATGGGCAT GGTCCCGGCT TTCCAGTTCC CCGGCTGGCA GTGGACCTCG
CTGGTGCTGA CCATCCCCGT CATCGCCTAC GGCGGCTGGC CGTTCCACAA GGCCGCCGCG
GTGAACCTGC GCCACGGCTC GGCCACCATG GACACCCTGG TCTCGCTGGG GACCCTGGCC
GCGTTCGGCT GGTCGGTGGT CGCGCTGTTC TTCGGCTCGG CGGGCATGGT CGGCATGACC
CACGGCTTCT CCTTCGGCCT CACCTCCGGC GGGGGCTTGA GCAACATCTA CTTCGAAGCC
GCCGCCGCGG TCACCGCGCT GATCCTGCTG GGCCGGTTCT TCGAGCACCG CGCCAAGAAA
CGCGCCGGTT CGGCGCTGCG GGCCCTGATG GACCTGGGCG CCAAAGACGT CACGGTCCGC
CGCGACGGCG TCGAACACCG CGTCCCCGCG GCCGAGCTGC GGGTCGGCGA GGAGTTCGTG
GTGCGTCCCG GCGAGAAGAT CGCCACCGAC GGCGAGGTCG TCGAGGGCCA CTCCGCCGTC
GACGAGAGCA TGCTGACCGG CGAATCGGTG CCGGTCGAGG TCGGCGTCGG CGACACCGTC
ACGGGGGCGA CCCTGAATTC CGGCGGCCGA CTGGTCGTGC GCGCCACCCG CGTCGGCTCC
GACACTCAGC TGGCCCAGAT GGCCCGCCTC GTCGAGGAGG CCCAGACCGG CAAGGCCGAG
GTACAACGGT TGGCCGACAA GGTGTCCGGC ATCTTCGTGC CGATCGTCAT CGCGCTGTCG
CTGGCCACCC TCGGCGTCTG GCTCGCCGTC ACCGGCGACG CCGCCTCCGC CTTCACCGCC
GCCGTCGCGG TGCTCATCAT CGCCTGCCCG TGCGCCCTGG GCCTGGCCAC ACCCACCGCG
CTCATGGTCG GCACCGGACG CGGCGCGCAA CTGGGCATCC TGGTGGGCGG CCCGCAGGTG
CTGGAATCCA CCCGCGCCAT CGACACCGTC GTCCTCGACA AGACCGGCAC CGTCACCACC
GGCACGATGG CCCTGGCGGA GGTCATCCCG GCCGACGGCG TCGAAGCCGG GGAACTGCTG
CGACTGGCCG GAGCCGTCGA GGCGGCCTCC GAACACCCGA TCGCGCGGGC CGTCGCCGCC
GCGACCGAGT CCCTGCCCGC CGTCACGGAC TTCAGCAACC ACGCCGGTCT CGGCGTCACC
GGCATGGTCG ACGGCCACGC CGTCAGCGTC GGCCGCGTCG CGATGCTGAC CGAATGGGCG
CTGAGCCTCG ACGACCGTCT CACCAAGGCC AGGGACGCGG CCGAATCGCA GGGCAAGACC
GTCGTGGCCG CCAGCTGGGA CGGCCAAGTG GCCGGACTGC TGGTCGTCGC CGACGAGGTC
AAACCCTCCA GCCGCGAGGC GGTGTCCCGG CTGCGGGCGC TCGGCCTGAC CCCGGTGCTG
CTGACCGGCG ACAACCGTCG CGCCGCCGAG GCCGTCGCGG CCACCGTCGG CATCGACGAG
GTGCACGCCG AGGTGCTGCC GAAGGACAAG GTGGACGTCG TGAAGTCCTT GCAGGACAAG
GGCCGCACGG TCGCCATGGT CGGCGACGGC GTCAACGACG CCGCGGCGCT GGCCCAGGCC
GACCTGGGCA TCGCCATGGG CACCGGCACC GACGTGGCCA TCGAGGCGTC CGACCTGACC
CTGGTCCGCG GCGACCTGCT GGTGGCCGCC GACGCGATCC GGCTGTCCCG CAAGACACTG
CGCACCATCA AGGGCAACCT GTTCTGGGCC TTCGCCTACA ACGTGGCCGC GCTGCCGCTC
GCGGCGCTGG GCGTGCTGTC CCCGATGATC GCCGGGGCCG CGATGGCCTT CTCCTCAGTG
TTCGTCGTCG GCAACAGCCT GCGGCTGCGT CGCTTCAACT GA
 
Protein sequence
MKTDTENIIE LNIGGMTCAS CANRIEKKLN RMDGVTATVN YATEKATATV PDGVAAADLI 
AVVEKTGYTA QPKAEVEEPD ADAELDGLRY RVILSLALAL PVVAMGMVPA FQFPGWQWTS
LVLTIPVIAY GGWPFHKAAA VNLRHGSATM DTLVSLGTLA AFGWSVVALF FGSAGMVGMT
HGFSFGLTSG GGLSNIYFEA AAAVTALILL GRFFEHRAKK RAGSALRALM DLGAKDVTVR
RDGVEHRVPA AELRVGEEFV VRPGEKIATD GEVVEGHSAV DESMLTGESV PVEVGVGDTV
TGATLNSGGR LVVRATRVGS DTQLAQMARL VEEAQTGKAE VQRLADKVSG IFVPIVIALS
LATLGVWLAV TGDAASAFTA AVAVLIIACP CALGLATPTA LMVGTGRGAQ LGILVGGPQV
LESTRAIDTV VLDKTGTVTT GTMALAEVIP ADGVEAGELL RLAGAVEAAS EHPIARAVAA
ATESLPAVTD FSNHAGLGVT GMVDGHAVSV GRVAMLTEWA LSLDDRLTKA RDAAESQGKT
VVAASWDGQV AGLLVVADEV KPSSREAVSR LRALGLTPVL LTGDNRRAAE AVAATVGIDE
VHAEVLPKDK VDVVKSLQDK GRTVAMVGDG VNDAAALAQA DLGIAMGTGT DVAIEASDLT
LVRGDLLVAA DAIRLSRKTL RTIKGNLFWA FAYNVAALPL AALGVLSPMI AGAAMAFSSV
FVVGNSLRLR RFN