Gene Snas_5817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5817 
Symbol 
ID8887033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6184736 
End bp6186346 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514540 
Protein GI291303262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGG AATACGTATC CCGGGCCGAA CGCGTCGTCG ACGCGCTGCT GGAATCCGAC 
CCGGAGGCGG CGATGTGGGC GGGAGACCAC CGCTTCGACG ACCGGCTGCC GGACTACTCG
TCCGAGGGCC TGGCCGCCAA GCGGTCGATG CTGACCGAGG CCTCGCACGC GCTGGTCGAG
ATCGACGCCG AGGACCTGGG CACCCCCGAC GCCGTCGACC TGGAGATCCT CACCAACCAG
GTCGCCGCGC GGCTGTTCGA GCTGACCGAG ACCCGCGACC ACGAGTGGAA CCCGCTGGTC
TACAACCCCG GCATGCTGCT CAACACGCTG CTGCTGCGGC CCTCGGCCCC GGCTGCCGAA
CGACTGACGG CACTTCAGGC GCGGCTGGCG GCCATCCCCG ACCACCTGGC CACCGCGCGC
GCCAACCTGA CCGACGTGCC CGCCGTCTAC GCCGAGACCG GCGCCGAACA GTTCCGGGGC
ACCGCCGCGC TGGTGCGCGA CGAGGTGCCG CGACTGGCCG AAGAGGCCGG TGCGACCGTC
GACGTCGAGA CCGTCGCCGG TGAGCTGGAG GCGTTCGCCG ACTGGCTGTC GCGGCTGCCG
GACGGACGCT CGCCGCGACT GGGCCGTCGA CTGTGGGACG CCAAGCTGTG GCACACCCTG
GAGACGCCGA TGGCGGGAGC GTCGATTCTG GACCGGGCCT GGACCCGGCT GGACGAGGTC
ACCGCCGAGC TCGACGAACT GGCGGCGCGA CTCGACCGCG ACGGCGGAAC GGCCGACGGC
GCGTCCGGTG CCGAGGTCAC CGCCCGGGTG CTGGCCCGGC TGGGCGCCGA CCGCCCCGAC
AACGCCACCG TCCTGGACGC CGCCCGCCGC GCGGTCGCCG AGACCACCGA CTTCGTGCGC
GAACACGACC TGATCACCAT CCCCGCCGAC CGGCTCGAGG TCGTGGAGAT GCCCGAACAC
GACCGGGGCG TGTCGGCCGC GTACCTCGAC CCGCCAGGCA CCCTGGACGA CCCGTCGATG
CCGACCTTCT ACGCGATCTG CCCGGCCCCG GCCGACTGGA GCACCGAACA GGTCGCGTCG
TTCTACTCCG AGTACAACCA CCACATGATC CGCAACCTCA CCGTCCACGA GGCGATCCCG
GGCCACCACG TCCAGCTCGC CCACGCCCGC ACCTACCGGG GCAACACCCG GGTGCGGGAC
ATGATGATGA GCGGGACCTT CGTGGAGGGC TGGGCGGTCT ACACCGAGGA GCTGATGGTC
GAGCACGGCT ACGGCGGCCC GGAGGTGCTG GCCCAGCAGC TGAAGATGCA GCTGCGCATG
ATCATCAACG CCATCATCGA CCAGTCGATC CACTGTGACG ACATGTCCGA GGCCGAGGCC
ATGGACCTGA TGACCCGGCG CGGCCACCAG GCCCACGCCG AGGCCGCGAG CAAGTGGCGC
CGCGCGCTGC TGTCGTCCAC CCAGCTGTCC ACGTACTTCG TCGGCTACAC CGAGATGCGC
GCCATCGCCG ACAGCTGCCC GACCGGCCGA CCGGGGCGCG ACTGGCACGA CCGGATGCTG
TCCTTCGGGA GCCCGGCACC ACAGCACGTG GTCAGGCTGC TGGCCGGATA G
 
Protein sequence
MHEEYVSRAE RVVDALLESD PEAAMWAGDH RFDDRLPDYS SEGLAAKRSM LTEASHALVE 
IDAEDLGTPD AVDLEILTNQ VAARLFELTE TRDHEWNPLV YNPGMLLNTL LLRPSAPAAE
RLTALQARLA AIPDHLATAR ANLTDVPAVY AETGAEQFRG TAALVRDEVP RLAEEAGATV
DVETVAGELE AFADWLSRLP DGRSPRLGRR LWDAKLWHTL ETPMAGASIL DRAWTRLDEV
TAELDELAAR LDRDGGTADG ASGAEVTARV LARLGADRPD NATVLDAARR AVAETTDFVR
EHDLITIPAD RLEVVEMPEH DRGVSAAYLD PPGTLDDPSM PTFYAICPAP ADWSTEQVAS
FYSEYNHHMI RNLTVHEAIP GHHVQLAHAR TYRGNTRVRD MMMSGTFVEG WAVYTEELMV
EHGYGGPEVL AQQLKMQLRM IINAIIDQSI HCDDMSEAEA MDLMTRRGHQ AHAEAASKWR
RALLSSTQLS TYFVGYTEMR AIADSCPTGR PGRDWHDRML SFGSPAPQHV VRLLAG