| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5808 |
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| Symbol | |
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| ID | 8887024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6173211 |
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| End bp | 6177266 |
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| Gene Length | 4056 bp |
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| Protein Length | 1351 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003514531 |
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| Protein GI | 291303253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.294236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.50078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGA AAGACCTCTC CGGCCTGCTG AACGCCGCCC TGGACGAGCC GGGCCTGGCG
CGGGTTCGCG AACTCGCCGC CGAAGGCGGC CCGACGGCCG AGCAGGTTCA CGTGACCGCT
CCGGCCGCGG CGCGGCCGTT CACCGTCGCG GCGTTGGCGC AGGCCGAACG CACCGTGCTG
GCCGTGACCG CCACCAGTCG CGAGGGCGAG GAGCTGACGC AGTCGCTAGC CGGGCTGCTG
CCGGACGGGT CGGTGGCCTT CTACCCCGCC TGGGAGACGC TGCCGCACGA GCGGTTGTCG
CCGCGAAGCG ACACCGTCGG GAAGCGGCTG GCGCTGCTGC ACCGGCTGGC CCATCCGCAG
GGCGCGCCGC TGCGGGTCGT GGTGGCGCCG GTGCGCAGCC TGCTGCAACC GCAGCTGAAG
GGCCTCGGCG ACCTGAAGCC GGTGCGGCTG GCCGTCGGCG AGTCCACCGA CCTGTCGGAT
CTGGCCGCCG AGCTGTCCGA TCTGGCGTAC GCGCGGGTGG ACCTGGTCGA GAAGCGCGGC
GAGTTCGCGG TGCGCGGCGG CATCCTGGAC ATCTTCCCGC CCACCGACGA GCATCCGTCC
CGTGTGGAGT TCTTCGGCGA CGAGATCGAG TCGATCCGCT CGTTCGCGGT CGCCGACCAG
CGGTCGCTCG ACAAGGCCGA CACGCTGTTC GCGCCGCCGT GCCGGGAACT CTTGCTGTCG
CCGAGGGTGC GCGAGCGCGC CGCCGAACTG GGTCAGCAGC ACCCGGGTCT GGCCGAGCTG
TGCGAGCAGC TGGCGCAGGG CATTCCGGTG GAGGGCATGG AATCGCTGAC CCCGGCGCTG
CTGGGTGCCG ACCAGCTGGA GCTGTTCGTG CAGACGATGC CGCGCGGCAC CGTCGTGGTC
CAGTGCGACC CGGAGCGGAT CCGTTCCCGC GCCCACGATC TGGTGGCCAC GAGCGAGGAG
TTCCTCCAGG CCAGCTGGGC GGCGGCCGCC ACCGGCGGCA AGGCCCCCAT CGACCTGGAC
GCGGCCGCGT TCAAGAGCCT GTCCGACGTG CGCCAGGCCG CGTCCGACCA CGGCTGCCCG
TGGTGGTCCA TGGGTCCGTT CGGTGTCACC GAGGACCTCA GCCCGGCGCA GCTGGAGGAA
CGCAAACGCG CCCGCGAACT CGCGGAGATC ACCGGCGAGG GCTTCGAGGA ACTGGTCGTC
GCCGACGAGA CCTCGGTGAC CGTCACGGCG ACCCCGGCAC CGCTGTACCA CGGGAACTCG
GTCAAGGTCA CCGGCGACGT CAAGCGGTGG ACGAACGACG GCTGGCGGGT GTGCCTGGTG
TTCGCGGGCC ACGGCCTGGC CGAACGCGCC GTGGAGCAGC TGGCCGAGGC GGGCGTGGGC
GCCAGCCTCG CCGACTCGGT GACCCGGCCC GACAGCGATG GAAACCCCAC GGCCCCAACC
GAACCCGCGA TCTGGGCCAG TGCGCCGGAC GACGGGCTGG CCGGTGGCAG GCAGCCGGGA
CCGGTGGGCG GCGCGGACCT GAACTCCCCC TTCACGCCAC CGACCGCGTC GTCCAAGGCC
GACGCGGGCC AAGGTGGAGC CGGGGCGAGC GGCGGTAGCC AAGCGGGCGG CCCGGCCGAC
GCGGGCCATT CGGGACCAGG CTCGGTCGGC TTCGGCGGTT CGGCCGCCAC AGCCGACGCG
GGCCATTCGG GACCAGGCTC GGTCGGCTTC GGCGGTTCGG CCGCCACAGC CGACGCGGGT
CGAGCGGGCG GCTCCGGGCG GGCCGGGGCC GTGGCGGCCG GTGCCGCTGG CCACGCCGTG
ACGGGCACCG TCGGCCGCGA CGGCTCGGTG GCCGTACTGC GGCCGGGCCA CGTCACCGTC
ACCGTCGGCG GGCTGAGCCA CGGCATCGTC GACGAGGCCG CGAAACTGGC GATCCTCACC
GGCGACGACA TCTCCGGCGG CAAGGGCGCC ACCACCCGCG ACATGCGCAG GATGCCGTCG
CGGCGCAAGG GCGGGGTCAA CCCGCTCGAA CTGTCCAATG GCGACTATGT CGTGCACGAG
CAGCACGGCG TCGGCCGCTA CATCGAACTG GTGCGCCGCA CCGTCAACGG CGCCGAGCGC
GAGTACCTGG TCATCGAGTA CGCCGCCAGC AAACGCGGCC AGCCCGCCGA CCGGCTGTTC
GTGCCGACCG ACGCGCTCGA CCAGCTGACC CGCTACGTCG GCGGCGAGAT GCCCAGCGTC
CACAAGCTGG GCGGTTCCGA CTGGCAGAAG GCGAAGTCGC GCGCCAAGAA GGCCGTCCGC
GAGATCGCCG CCGAACTCAT CAAGCTGTAC GCGGCGCGGC AGGCCACCGA GGGCCACGCC
TTCGGGCCGG ACACGCCGTG GCAGCGCGAA CTCGAGGACG CGTTCCCGTA CCAGGAGACC
CCGGACCAGG CCGGAGCCAT CGACGAGGTC AAGTCGGACA TGATGGGCCG CACCCCGATG
GACCGGCTCA TCTGCGGCGA CGTCGGCTAC GGCAAGACCG AGATCGCGGT GCGGGCCGCG
TTCAAGGCGG TCACCGACGG CAAGCAGGTC GCGGTGCTGG TACCCACGAC GCTGTTGGCC
AGCCAGCACC TGAACACCTT CACCGAGCGG ATGTCGCAGT TCCCGGTGAC GATCAAGCAG
CTGTCGCGGT TCCAGACCGA CGCCGAGGCC GAGCAGATCC GCAAGGGCCT GATCGCGGGC
GAGGTCGACA TCGTGGTCGG CACCCACCGG CTGTTGCAGA CCGAGACCCG GTTCAAGGAC
CTGGGTCTCG TCATTGTGGA CGAAGAGCAG CGGTTCGGCG TCGAGCACAA GGAGAAGCTG
AAGGCGCTGC GCGCCCACGT CGACGTGCTG GCGATGTCGG CGACGCCGAT CCCGCGCACC
CTGGAGATGG CGATCACCGG CATCCGCGAG ATGTCCACGA TCACCACCCC GCCGGAGGAG
CGGCACCCGG TGCTGACCTT CGTGGGCGGC TACGAGGACA AGCAGGTCGG CGCCGCGATC
CGGCGCGAGC TGCTGCGCGA CGGCCAGGTG TTCTACCTGC ACAACCGGGT CGAGTCGATC
GAGAAGGCCG CCACCCGGCT GCGCGAGATC GTGCCGGAGG CGCGGGTCGT GGTCGCGCAC
GGCAAGATGG GCGAGAACCG GCTGGAACAG ATCATGCAGG ACTTCTGGAA CGGCGAGTTC
GACGTCCTGG TGTCCACGAC GATCATCGAG TCGGGCATCG ACATCCCCAA CGCCAACACC
CTGATCGTGG AGCGCGCCGA CCTGCTGGGT CTGTCGCAGC TGCACCAGAT CCGGGGCCGG
GTGGGCCGGG GCCGGGAACG CGCCTACGCC TACTTCATGT ATCCGCCGGA GAAGCCGCTG
ACCGAGCAGG CCCACGAGCG GCTGGCGACC GTCGCGCAGC ACACCGAACT GGGCGCGGGC
ATGTACGTGG CCATGAAGGA CCTGGAGATC CGGGGCGCGG GCAACCTCTT GGGCGGCGAG
CAGTCCGGGC ACATCGCGGG CGTCGGCTTC GACCTGTACG TGCGGATGGT CGGCGACGCG
GTGCGCACCT TCAAGGGCGC CAAGGAGGAG ATCCTCACCG AGGTCAAGAT CGACCTGCCG
GTGGACGCCC ACATCCCCTA CGACTACATC CCGGTGGAAC GGCTGCGGCT GGAGATGTAC
CGCAAGCTGG CCGAGGTCCG CGACGACGCC GAACTGGACG AGGTCCGCAC CGAGATGGCC
GACCGCTACG GCGATCTTCC CGCCGAAGTG GACAACCTGG TCCACGTCGC CCGGTTCCGG
CTGCTGGCCC GCGCCGCCGG TCTGTCCGAT GTGTCGCTCC AGGGCCGCCA CATCCGGCTG
TCGTCGATCA CGCTGTCGGA CTCCAAACAG CTGCGCCTCA AGCGCCACTA CCCCGACTCG
GTGTACAAGA AGGCCGCCGA GCTGATCTCG GTGCCGCGCC CGCACACCGC GCGGGTCGGC
GGGTCCCCGA TGGAGGGCCC GGCACTGTTG CAGTGGTGCG CCGAACTCAT CAAGGACGTG
ACCGAGGCAC CAGCCCCGGC CGCTACTCCT GCATGA
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| Protein sequence | MSSKDLSGLL NAALDEPGLA RVRELAAEGG PTAEQVHVTA PAAARPFTVA ALAQAERTVL
AVTATSREGE ELTQSLAGLL PDGSVAFYPA WETLPHERLS PRSDTVGKRL ALLHRLAHPQ
GAPLRVVVAP VRSLLQPQLK GLGDLKPVRL AVGESTDLSD LAAELSDLAY ARVDLVEKRG
EFAVRGGILD IFPPTDEHPS RVEFFGDEIE SIRSFAVADQ RSLDKADTLF APPCRELLLS
PRVRERAAEL GQQHPGLAEL CEQLAQGIPV EGMESLTPAL LGADQLELFV QTMPRGTVVV
QCDPERIRSR AHDLVATSEE FLQASWAAAA TGGKAPIDLD AAAFKSLSDV RQAASDHGCP
WWSMGPFGVT EDLSPAQLEE RKRARELAEI TGEGFEELVV ADETSVTVTA TPAPLYHGNS
VKVTGDVKRW TNDGWRVCLV FAGHGLAERA VEQLAEAGVG ASLADSVTRP DSDGNPTAPT
EPAIWASAPD DGLAGGRQPG PVGGADLNSP FTPPTASSKA DAGQGGAGAS GGSQAGGPAD
AGHSGPGSVG FGGSAATADA GHSGPGSVGF GGSAATADAG RAGGSGRAGA VAAGAAGHAV
TGTVGRDGSV AVLRPGHVTV TVGGLSHGIV DEAAKLAILT GDDISGGKGA TTRDMRRMPS
RRKGGVNPLE LSNGDYVVHE QHGVGRYIEL VRRTVNGAER EYLVIEYAAS KRGQPADRLF
VPTDALDQLT RYVGGEMPSV HKLGGSDWQK AKSRAKKAVR EIAAELIKLY AARQATEGHA
FGPDTPWQRE LEDAFPYQET PDQAGAIDEV KSDMMGRTPM DRLICGDVGY GKTEIAVRAA
FKAVTDGKQV AVLVPTTLLA SQHLNTFTER MSQFPVTIKQ LSRFQTDAEA EQIRKGLIAG
EVDIVVGTHR LLQTETRFKD LGLVIVDEEQ RFGVEHKEKL KALRAHVDVL AMSATPIPRT
LEMAITGIRE MSTITTPPEE RHPVLTFVGG YEDKQVGAAI RRELLRDGQV FYLHNRVESI
EKAATRLREI VPEARVVVAH GKMGENRLEQ IMQDFWNGEF DVLVSTTIIE SGIDIPNANT
LIVERADLLG LSQLHQIRGR VGRGRERAYA YFMYPPEKPL TEQAHERLAT VAQHTELGAG
MYVAMKDLEI RGAGNLLGGE QSGHIAGVGF DLYVRMVGDA VRTFKGAKEE ILTEVKIDLP
VDAHIPYDYI PVERLRLEMY RKLAEVRDDA ELDEVRTEMA DRYGDLPAEV DNLVHVARFR
LLARAAGLSD VSLQGRHIRL SSITLSDSKQ LRLKRHYPDS VYKKAAELIS VPRPHTARVG
GSPMEGPALL QWCAELIKDV TEAPAPAATP A
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