Gene Snas_5789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5789 
Symbol 
ID8887005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6152374 
End bp6153120 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IA, variant 3 
Protein accessionYP_003514512 
Protein GI291303234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.805096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCAC GCCGGTTACG GCGGACACGG GGCGGCCGGT TCGGGGACGA TGGACGCGTC 
CCGATCCTCG ACACCGGAAG CGAGCACACC GTGGTCCCCA CCCCGAAACT GGTCATCTTC
GACAACGACG GGGTCCTGGT CGACTCCGAG CGGCTGTCCA ACATGGTCTT CGCCGAGTGG
ATCACCGAGA ACGGGCTGCC CACCAGTTAC GAGGAGTCGG TGGAGTACTA CATGGGCAAA
CGCACCACCG ACTGCGCCGC CGAGATCGAG CGGCGGCTGG GCCGGGAACT GCCCGCCGAC
TTCGTCGCGG TCTACGAGAG CCGCTGCAAC GATCTGCTCA GCCGTGAACT GACCACCGTC
GACGGCGTTG AGGAACTGCT GGACCGCCTG GACGGGAACG CGACCCCGTA CTGCATCGCC
TCCTCCGGCA CCCCCGACGA GATCGCGCTG CGGCTCGCCA CCACCGGCCT GGACGCCCGC
TTCGACGGCA ACATCTACTC CGGAACCCAG GTGCCGAACG GCAAACCGGC CCCGGACCTG
TTCCTGCACG CCGCCGCCCG GATGGGCGTC GACCCGTCCG ACTGCGTGGT CATCGAGGAC
TCCCCGGCCG GGATCACCGG CGCCAAGGCC GCCGGGATCC GGGTGATCGG CCATGCCGCG
CTGCTGCCGC CGCACCGGCT GCGGGAGGCC GGGGCCGACG AGGTGGTCGC CGGGATGCGC
GAGGTGGGCC CGCTGCTGGG CCTGTGA
 
Protein sequence
MTSRRLRRTR GGRFGDDGRV PILDTGSEHT VVPTPKLVIF DNDGVLVDSE RLSNMVFAEW 
ITENGLPTSY EESVEYYMGK RTTDCAAEIE RRLGRELPAD FVAVYESRCN DLLSRELTTV
DGVEELLDRL DGNATPYCIA SSGTPDEIAL RLATTGLDAR FDGNIYSGTQ VPNGKPAPDL
FLHAAARMGV DPSDCVVIED SPAGITGAKA AGIRVIGHAA LLPPHRLREA GADEVVAGMR
EVGPLLGL