Gene Snas_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5788 
Symbol 
ID8887004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6151714 
End bp6152358 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003514511 
Protein GI291303233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.785726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACA CACCGGTGCG GGTACTGATC GTGGACGACC AGACCCTGAT GCGGCAGGGC 
CTGCGCAAAC TGCTGGAGAT CGAACCGGGC GTCACGGTGT CCGGTGCCGC CGCCAGCGGC
CAGGAAGCCT TGGCGCTGTT GGCGACCACG ACCGTGGACG TCGCGCTCGT CGACGCGAAG
ATGCCCGGCA TGGACGGCGT CGCGCTGATC CGCCGGCTCG CGGCCGAGCA CCCGTCGGTC
GCCTGCGTCA TACTGACCAC TTTCGACGAT GACGAGTACA TCTTCGGCGG TCTGGCCGCC
GGGGCCAGGG GTTTCCTGCT CAAGGACACG CCACCGGACG AGCTGGTCAC CACGCTGCGC
CGGGCCGCGG CCGGCGAGAC CGTCCTGGGT TCGCCCGCCG CCGAACGGGT GGTGGCCCGG
CTGCGGACCG ACCCGCACGG CACCGGCCTG GAGGCATTGT CGGCCCGGGA GCGCGAGGTC
GGCGACCTGA TCGCGCAGGG CGCGCACAAC CGGGAGATCG CCCGGCGGCT GTTCATCACC
GAGGGGACGG TCAAGAACCA CGTCACCGCG TTGCTGCGCA AACTCGGCAT GCGCGACCGC
ACCCAGCTGG CGCTGTTCCT GGCCAAGCAC CGCGATCAGC GGTGA
 
Protein sequence
MDDTPVRVLI VDDQTLMRQG LRKLLEIEPG VTVSGAAASG QEALALLATT TVDVALVDAK 
MPGMDGVALI RRLAAEHPSV ACVILTTFDD DEYIFGGLAA GARGFLLKDT PPDELVTTLR
RAAAGETVLG SPAAERVVAR LRTDPHGTGL EALSAREREV GDLIAQGAHN REIARRLFIT
EGTVKNHVTA LLRKLGMRDR TQLALFLAKH RDQR