Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5788 |
Symbol | |
ID | 8887004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6151714 |
End bp | 6152358 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003514511 |
Protein GI | 291303233 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.785726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGACA CACCGGTGCG GGTACTGATC GTGGACGACC AGACCCTGAT GCGGCAGGGC CTGCGCAAAC TGCTGGAGAT CGAACCGGGC GTCACGGTGT CCGGTGCCGC CGCCAGCGGC CAGGAAGCCT TGGCGCTGTT GGCGACCACG ACCGTGGACG TCGCGCTCGT CGACGCGAAG ATGCCCGGCA TGGACGGCGT CGCGCTGATC CGCCGGCTCG CGGCCGAGCA CCCGTCGGTC GCCTGCGTCA TACTGACCAC TTTCGACGAT GACGAGTACA TCTTCGGCGG TCTGGCCGCC GGGGCCAGGG GTTTCCTGCT CAAGGACACG CCACCGGACG AGCTGGTCAC CACGCTGCGC CGGGCCGCGG CCGGCGAGAC CGTCCTGGGT TCGCCCGCCG CCGAACGGGT GGTGGCCCGG CTGCGGACCG ACCCGCACGG CACCGGCCTG GAGGCATTGT CGGCCCGGGA GCGCGAGGTC GGCGACCTGA TCGCGCAGGG CGCGCACAAC CGGGAGATCG CCCGGCGGCT GTTCATCACC GAGGGGACGG TCAAGAACCA CGTCACCGCG TTGCTGCGCA AACTCGGCAT GCGCGACCGC ACCCAGCTGG CGCTGTTCCT GGCCAAGCAC CGCGATCAGC GGTGA
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Protein sequence | MDDTPVRVLI VDDQTLMRQG LRKLLEIEPG VTVSGAAASG QEALALLATT TVDVALVDAK MPGMDGVALI RRLAAEHPSV ACVILTTFDD DEYIFGGLAA GARGFLLKDT PPDELVTTLR RAAAGETVLG SPAAERVVAR LRTDPHGTGL EALSAREREV GDLIAQGAHN REIARRLFIT EGTVKNHVTA LLRKLGMRDR TQLALFLAKH RDQR
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