Gene Snas_5719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5719 
Symbol 
ID8886934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6084822 
End bp6085880 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003514442 
Protein GI291303164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.512451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGA AGTCCGCGGC CCCGGTACTG GTCACCGGCG CCACCGGCTA CATCGCAGGC 
CACGTCATCA AGGAACTGCT GGCCAACGGC TACATCGTGC GCGGCACCGT CCGCGACACC
TCCGCGACCC ACAAGACCGC CCACCTGCGC GCGCTGCCCG GCGGCGAGCG GCTCGAGTTC
GTCGCCGCCG ACCTGACCCG CGACGACGGT TGGGCCAAGG CCGTCGACGG TTGCGAATAC
GTCATGCACG TGGCCTCCCC GCTGCCCAAC CACACGCCCA AGAACGAGGA CGAGGTCATC
CGTCCCGCCG TCGACGGCAC CCTGCGGGTG CTGCGGGCCT GCGCCGACGA CCCCGGCGTC
AAACGGGTCG TGCTGACCTC CTCCATCGCC GCGATCCGCA TCGGACACCC CGACGACGGC
CGGGCCCGCA CCGAGGACGA CTGGTCCAAT CTCGACAAAT GCCCGGTCTA CCCGAAGAGC
AAGACCCTCG CCGAGCGCGC CGCGTGGGAC TTCATGGCCG ACAAGGGTTC TGCGGCCGGC
TTCGAGCTGG TGGCCGTCAA CCCCGGCCTG GTGCTGGGCC CGCTGCTCAA CGACGACTCC
AGCACCTCGG TGGAGACACT GCGCAAACTG GTCAACCGCG AACTGCCCGG TTCGCCGCGG
CTGGGCTTCG CCGTCGTGGA CGTCCGCGAC GTGGCCATCG CGCACCGGCT CGCGCTGGAA
ACCCCCGCCG CGGCCGGAAA CCGCTACATC GTCGCGGGCG AACACCTGTG GCTCAAGGAC
ATGGCGAGCA TCCTCGCCGC CGAGTTCAAC CCGCGCGGCT ACCGGATACC CACCCGCGCC
ATCCCGAACT GGGTGATGTG GCTGGCGGCC CGCTTCGACA AGACCGCCAG GCTCGCGCTG
GACTTCATCA ACGTCCGCGA ACACCTGTCG GCCGACAAGG CCCGCCGCGA ACTGGGCTGG
AGCATGCGCC CCGTCGACGA GACCCTCATC GCCACCGTCG ACAGCATGAT CGAACTCGGC
ATGGTGCGCG ACCGGGAGAA GGCAAGCGCG CGCGGCTGA
 
Protein sequence
MTPKSAAPVL VTGATGYIAG HVIKELLANG YIVRGTVRDT SATHKTAHLR ALPGGERLEF 
VAADLTRDDG WAKAVDGCEY VMHVASPLPN HTPKNEDEVI RPAVDGTLRV LRACADDPGV
KRVVLTSSIA AIRIGHPDDG RARTEDDWSN LDKCPVYPKS KTLAERAAWD FMADKGSAAG
FELVAVNPGL VLGPLLNDDS STSVETLRKL VNRELPGSPR LGFAVVDVRD VAIAHRLALE
TPAAAGNRYI VAGEHLWLKD MASILAAEFN PRGYRIPTRA IPNWVMWLAA RFDKTARLAL
DFINVREHLS ADKARRELGW SMRPVDETLI ATVDSMIELG MVRDREKASA RG