| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5667 |
|---|
| Symbol | |
|---|
| ID | 8886882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6024404 |
|---|
| End bp | 6026059 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003514390 |
|---|
| Protein GI | 291303112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.127458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACC TCGCGCGCAG GCTCATCGAC GTGGCCGCCC CCAACGGACT CCCGTTGGCG
GCCGTGGCGG CGATGCTGCT GCTGCCGACG CCGTGGCCCG GCTACCTGCT GAGCTTGGCC
ACGCTGGGCT ACGGCTGCTA CCGGTACCGC GCCGACGGCC TCGGCCAGCA CCTCATCGGC
CGGATCCTCG CCATCGCCGC GATCCTGATC GGCCTCGCGA TGGGCTCGCA GGGCCGCGTC
GGCTACTCCT GGGCGATCGC GGGCACGCTG CTCATCGCGA TCATCGCCTT CGAACCGCGC
CTGGTCACCG CGCTGACCGT CCGCAAGCTC GAGACCGCCA ACCTGCCGGT CAACCGCTCC
GGCCTGGAAC GCTGGAACAA CCCCCGCACC GCCTTCGCCC TGATCACCGT TCTGTCACTG
GCGTTCATCG CCGCGAGCGC CTTCGGCTGG GGACAGTGGG CCGTGACCGT CGCCTGCGGC
CTGGCCGCCG CCGGACTCGC CGCTGGAACC GTCGAGAAAT GGCTTGGCCG ACGCCGTCGC
GCCCACTCCG GCGACAACGA CGTGCTGGCC GCCGTCAAGG CGCACGCGCC GCGGTTCATC
GTCCACTTCG CCGCTCCCGA GGGCTCGGAA TACCAGCTGC GACTGTGGCT GCCGTACTTC
GACCGGCTCG GCGACGACTA CCTGATCGTG CTGCGCGACC GGGAGTTCCT GCCCGACTTC
GCGCCCCGCA CCGCCGCCCC CATCGTGGTG GCGCCGTCGA TCACCGACCT GGAGAGCATG
CTGGTCCCCA CCGTCAAAGC GGTGTTCTAC GTCAACCAGA GCATGCACAA CGCCCAGTGC
GTGCGCTTCG CGCACCTGAC GCACATCCAG CTGATGCACG GCGACAGCGA CAAACCCGCC
AGCTACAACC CGATCAGCGC CATGTACGAC CGGATCTTCG TGGCCGGACA GGCCGGGATC
GACCGCTACC ACAACCACGG CATCGACATC CCGACCGCGA AGTTCCGTAT CGTCGGGCAC
CCGCAGGTCG CCAAGGTCAC CGTCGGGCCC CGCGCCAAGG CCGCCGACAC GCCGACGGTG
GCGCTGTACG CGCCCACCTG GACCGGCCTG TCCGAGGACG TCAACTTCTG CTCGCTGCCG
ATGGCCCGCG ACATCTGCGC CGCCCTGATC GCGCGCGGCG TCACCGTCAT CGTCCGCCCG
CACCCCTACA CCCGCCGCAA CCCGGCCGCC GCCCGGCAAC TGGACGCCGT GGAACGGCTC
CTGGCCGCCG ACGCCGAGGC ATCGGGCCGG GAACACAAGT GGGGCAAGAC GACCAGCGAG
ACCATGTCGC TCATCGACTG CGTCAACGCC GCCGACGTCA TGGTCACCGA CGCCTCCGGC
GCGGCCAGCG ACTGGCTGTA CTCCGAGAAG CCGTTCGCGG TCACCGACCC CACCGGATTG
GGTGAAAAAC TGGCCGCCGA ACTGCCGCTG GCCAAAGCCG CCTACGTCAT CCGCGCCGAC
ACCGCCAACC TCGACGAGGT GTGCGCCGAA CTGCTCGACA CCGATTCCCT GGCCGCCGAC
AGGCACAAGA TGAAGGCCTA CTATCTTGGC GGCTTCCCCG CCGACGCTTA TGAAGAAGCT
TTCTTCACAG CTGCACGGGA TTGCTATACC GAGTAA
|
|---|
| Protein sequence | MAHLARRLID VAAPNGLPLA AVAAMLLLPT PWPGYLLSLA TLGYGCYRYR ADGLGQHLIG
RILAIAAILI GLAMGSQGRV GYSWAIAGTL LIAIIAFEPR LVTALTVRKL ETANLPVNRS
GLERWNNPRT AFALITVLSL AFIAASAFGW GQWAVTVACG LAAAGLAAGT VEKWLGRRRR
AHSGDNDVLA AVKAHAPRFI VHFAAPEGSE YQLRLWLPYF DRLGDDYLIV LRDREFLPDF
APRTAAPIVV APSITDLESM LVPTVKAVFY VNQSMHNAQC VRFAHLTHIQ LMHGDSDKPA
SYNPISAMYD RIFVAGQAGI DRYHNHGIDI PTAKFRIVGH PQVAKVTVGP RAKAADTPTV
ALYAPTWTGL SEDVNFCSLP MARDICAALI ARGVTVIVRP HPYTRRNPAA ARQLDAVERL
LAADAEASGR EHKWGKTTSE TMSLIDCVNA ADVMVTDASG AASDWLYSEK PFAVTDPTGL
GEKLAAELPL AKAAYVIRAD TANLDEVCAE LLDTDSLAAD RHKMKAYYLG GFPADAYEEA
FFTAARDCYT E
|
|---|
| |