Gene Snas_5666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5666 
Symbol 
ID8886881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6022544 
End bp6024253 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514389 
Protein GI291303111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.13145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGA ATTTGTCGCG CTTCGTGATG CGCACGGTGC TGCCCGGCGC ACTTCCGACG 
GCCGCGGTCG TCGTGTTCGC GCTCACTGAC CTGCCCTGGC TGGGCTATGG GCTGTGCCTG
GCGACGCTGG TCTTCCTGAC CGGCCTGTTC ACCACCGTCA GCGCGGGTGC CGGACGCACC
GCCCGCGCCG TCATCGTCGC CGCCGTGCTT TTGGGCACCG GGCTGTTCCG CGACGGCGAA
CTGAACCTGG GACTGGCCGG GGCCGGGGCG CTGCTGCTGG GCCTGCTGGG CGTGGAACCG
CTGGTGTTCA AGGCATTGCG GATGGGCAGG CTCAACACCG CGAACCTGCC GCTGCCGCGT
TCCACCGTGG CGCGCTGGGC CACGCCGCGC ACCGTCGCGA TGGTCAACAT CGGCATGATC
GCCGCCTTCA CCGGCTGCGC GGCCTTCCAG CTGTCGGGCT GGCCGCTGGT CGCCGTCGGC
GTGCTGGTCG TGTTGACCCA GGCGGTGCTG GTGCTGCGGG TGTGGGTGCG GCGCCGCGAC
GTCGCGTACC AGACCGACAC CGCGGTGCGC GCCGCCGTCG AGGCGCACGC GCCCAAGTTC
GCGGTGCACT TCTCCGGCCC GGGCTCGGCG GTCTACCAGC TGCTGATGTG GCTGCCGTAC
TTCGACCAGC TGGGCGACCC GTACGTGATC ATCCTGCGCG AGGGCCGCAC CGCCAAGACC
TTCGCCGCCG CCACCCCGGC CCCGATCGTG GTGGCCCCGT CCATCGCGGC CATGGAGAGC
ATGCTGGTGC CCAGCCTGCG CTCCGTCTTC TACGTCAACA ACAGCATGAA GAACACCCAC
TGCGTCCGCT TCGGCGAACT GACCCACATC CAGCTGATGC ACGGTGACAG CGAGAAACCC
GCCAGCCGCA ACCCGGTCAG CGCCATGTAC GACCGGGTGT TCGTGGCCGG GCAGGCCGGG
GTGGAACGCT ACCGCCGCTA CGGCGTCAAG ATCACCGACG AGCAGTTCCG CATCGTCGGC
CGCCCGCAGG TCGCCGACGT GCGCGTTGAC CGCGAACCCA TCGCCAACAA GAAACACCCG
ACGGTGCTGT ACGCGCCGAC CTGGACCGGC GACTCCGCCG ACGTCAACTT CTCCTCGCTG
CCGCTGGGCG AGGCGCTCGT GACCGAGCTG CTGGCCCGGG GCGCGACCGT CCTGATGCGC
GAACACCCCT TCACCCGTCG CAACGTCGCC GCCGGCCGGG CCCTGGAGCG GGTCCAGGAA
CTGCTGGCCA CCGACCGCGC CAAGACCGGG CGCCCGCACC GCTTCGGGGC CGAGACCTCC
GGCGAGATCA CGCTGGCCGA CTGCTTCAAC GACGCCGACG CGCTGGTGTC GGACGTCAGC
GGCGTCGTGT CCGACTGGCT GTACTCGGAG AAGCCGTTCG CCGTGACCGA CATGCTCGCC
GAGGGCGAGG AGTTCGCCGA GAGCTTCCCG CTGTCGACCG CGTCATATGT GATCCGTCAC
GACGGCTCCA ACATCCCCGA GGTGGTCTCG CAGCTGCTGG ACGCCGACCC GCGCGCGAGC
GAGCGGCGGG CGCTGAAGAC CCACTACCTG GGCGACTTCC CCGCCGACAC CTACACCAGG
GCGTTCCTGT CGGCGGCCCG CGAGACCTAC GAGACCCCGC GTGATCCGCG CGAGTCACAC
GAGCGCGACC AGGCAGTGAC GGCGAGCTGA
 
Protein sequence
MPKNLSRFVM RTVLPGALPT AAVVVFALTD LPWLGYGLCL ATLVFLTGLF TTVSAGAGRT 
ARAVIVAAVL LGTGLFRDGE LNLGLAGAGA LLLGLLGVEP LVFKALRMGR LNTANLPLPR
STVARWATPR TVAMVNIGMI AAFTGCAAFQ LSGWPLVAVG VLVVLTQAVL VLRVWVRRRD
VAYQTDTAVR AAVEAHAPKF AVHFSGPGSA VYQLLMWLPY FDQLGDPYVI ILREGRTAKT
FAAATPAPIV VAPSIAAMES MLVPSLRSVF YVNNSMKNTH CVRFGELTHI QLMHGDSEKP
ASRNPVSAMY DRVFVAGQAG VERYRRYGVK ITDEQFRIVG RPQVADVRVD REPIANKKHP
TVLYAPTWTG DSADVNFSSL PLGEALVTEL LARGATVLMR EHPFTRRNVA AGRALERVQE
LLATDRAKTG RPHRFGAETS GEITLADCFN DADALVSDVS GVVSDWLYSE KPFAVTDMLA
EGEEFAESFP LSTASYVIRH DGSNIPEVVS QLLDADPRAS ERRALKTHYL GDFPADTYTR
AFLSAARETY ETPRDPRESH ERDQAVTAS