| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5654 |
|---|
| Symbol | |
|---|
| ID | 8886869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6010835 |
|---|
| End bp | 6012184 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain-containing protein |
|---|
| Protein accession | YP_003514377 |
|---|
| Protein GI | 291303099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.150626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.213395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG TTACCTATGG GCCATCGAAA TATGTCAGTT TCGCGTTCGA TAACGACGGC
GCGCTGATCG TGCAGTCCAC CCGAACCGGA GCGATCGGCG TCGTACCGTC CGACAAGGCC
GAGGACGCCC GCAAGGCCTT GCTGCCGGGC AGCACGGTGA GCAACACATC GGACGGAATC
CTCAAAGACT TGAAGGACGG AGGATTCCTG GTACCCAGCA CCATGGACGA AGACCAGCTG
GTGCACGACC GGTACATCAA GCGGTACCAG AAGAACCGGC TCGACCTCAT TCTCATGCCG
ACAGAGCAGT GCAACTTTCG ATGCGTCTAC TGCTACGAAT CGTTCATCAG GGGCGAGATG
TCTCCCGAAC TCGTGGCCGG ACTGCACAGC TTCATCGCGG CAGAACACAG GGTCAACGGA
TTGGAGAGCC TGAACGTCTC CTGGTTCGGC GGCGAACCGC TACTAGCCGC CGACCTGGTG
CTCGACACCA CTCGCAGCCT GGCAGATTAC TGTCGTGCCA ACGGGATCGC GTCGAAGTTC
AGCGCCACGA CCAACGGCTA CCTCCTCAAG CCCGGCTACG CCGAGAAGGT CGTCCAAGCC
GGGGTACGCC ATTTCCAGAT CACATTGGAC GGAACCAAAC ACGACCATGA CAAGCGACGC
GTCGACATCG ATGGGGCCGA GACATTCGAC GTCATCATGG CGAACCTCCG CCATCTCAAG
TCCACAGATC TCGACTTCAC CATCATGTTG CGACACAATT TCGATCCCGA AGGTCTGCGG
CGCCTCGACG ACTACATCGA CATGATTCAG CGGGAATTCA GCGATGACCC CCGATACACC
ACGCATTTCG CTGCCATAGG CAAATGGGGA GGCGCCAAAG ACGACGACCT CGTGGTCTGT
GAGGGCCGTA CCGGCCCGCA AGCGATCGCC CACGCGCGGG GCCTGGCCAT TTCCGCCGGT
TTCAAAGTCG ACCTGCTCGA GAACGGCCTG AAGCCCGAGG GTTCCATTTG CTACGCCGCT
GATCCACGAA GCTTCGTCAT CGGTTCCGAC GGAACCGTCT ACAAATGCAC CGTCGAACTC
GACTACCACG AACGCAATAT GGTCGGCAAA CTTCATCCCG ACGGCACTAT GGACCTCGAT
TGGCGCAAAC TCGCCCTATG GTGCGAGACC GACGGCACCG ACCCGGGCAA GAAGTGCAAC
TCGTGCTACT TCGGGGGCGC ATGTCACGGT GCCGCCTGTC CGAAGGAATG GATGGACGAG
GACGACTGCC ACTGCCCACC AAGCAAACAG GTGATTCGAG AAACGCTTCC CCTTGTGCGG
CGCAACTTCG CGGCGGGCGT TCAACGATGA
|
|---|
| Protein sequence | MTTVTYGPSK YVSFAFDNDG ALIVQSTRTG AIGVVPSDKA EDARKALLPG STVSNTSDGI
LKDLKDGGFL VPSTMDEDQL VHDRYIKRYQ KNRLDLILMP TEQCNFRCVY CYESFIRGEM
SPELVAGLHS FIAAEHRVNG LESLNVSWFG GEPLLAADLV LDTTRSLADY CRANGIASKF
SATTNGYLLK PGYAEKVVQA GVRHFQITLD GTKHDHDKRR VDIDGAETFD VIMANLRHLK
STDLDFTIML RHNFDPEGLR RLDDYIDMIQ REFSDDPRYT THFAAIGKWG GAKDDDLVVC
EGRTGPQAIA HARGLAISAG FKVDLLENGL KPEGSICYAA DPRSFVIGSD GTVYKCTVEL
DYHERNMVGK LHPDGTMDLD WRKLALWCET DGTDPGKKCN SCYFGGACHG AACPKEWMDE
DDCHCPPSKQ VIRETLPLVR RNFAAGVQR
|
|---|
| |