| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5620 |
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| Symbol | |
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| ID | 8886835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5975421 |
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| End bp | 5976887 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003514343 |
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| Protein GI | 291303065 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000613899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGATCG ACGTGACTCT CACTGAAGCG AAACCCCAGC CCAAGCACGT GACGTCCCCC
GAGGGACCCG ATACCCCCAC CCCCCACGCC CGGCGTTGGG GCCCGAAACT GTGGGCCATT
CTCTTTGTCG CCGGTCTGGC GATGTTCCTG GACGCACTCG ACGTCTCGAT GGTCGGCGTC
GCACTGCCGT CCATCGGCGC CGAACTGGGA CTTGACACCG CCAGCCTCCA GTGGATCGTG
AACGGCTACA TCCTCGGCTA CGGCGGACTG CTGCTGCTGG GCGGCCGGGC CGCGGACCTG
TTGGGCCGCC GCAAGGTCTT CCTCGGCGCT TTGGTCGTGT TCGGTGTTGC CTCCCTAGTC
GGCGGGCTCG TCGACCACGG TGGACTCCTG ATCGCCAGCC GGATCGTCAA GGGCGTCGCC
GCCGCGTTCA CCGCACCCGC GGCGTTGTCC ATCATCACCA CAACCTTCAA GCAGGGACAC
GACCGCAACC GGGCGCTGTC ACTGTTCACG GTGTTCGGTG CCACCGGTTA CGCGTCCGGC
CTGATCGTCT CCGGCCTGCT GACCGGCATC GACTGGCGAC TGACCTTCTT CGCGCCGGTC
GCGGTGGTCG CCGTGGTCAT CATCGCCGCC TTCTTCGTGG TGCCGAAGTC CTCGCCGGAG
CACGGCAGCA TCGACTACGC CGGTGCCGTC CTGCTGACCG GCGGCATGCT GGCCGCCGTC
TACACGATCG TGACCGCTCC CGAGACCGGC TTCACCCCGC TGGTGACCGC CACGGCCATC
GCCGCCGTCG CCTTCATCGG AGTGTTCCTG TTCGTGCAGA ACAAGGTCAA GGAGCCGCTG
ATCCGCCTGG GCATCTTCAA GATCGGCTCG ATCGTGCGGG CCAACCTGGC CGCGCTGGCG
ATCTTCGGTT CCTACATCAG CTTCCAGACC GTCGTGTCCC TCTACCTTCA GAACACCCTG
AAGTGGGACC CGCTGCAGAT GGCGCTGGCG CTGGCTCCCG CCGGAGTGAT CGTGGCCTTC
CTGTCCCCGA TCGCCGGCAA GTTCATCGAC CGCTTCGGCA CCAAGCCGAT GATCATCGCC
GCGATGGGCG CCTTCGTCCT GGGCTACCTG TGGTTCATCA TCCGCGGCGG CGACCCGACC
CCCGCCTACT TCGTGGACTA CCTGCCCTCG TTCCTGCTGC TGGGCCTGGG CTTCGCCCTC
GGCTTCTCGG CGGTCATGGT GCAGGCCACC GACGGCATCA GCGACGACGA GCAGGGCCTG
GCCTCCGGTC TGGTCCAGAC CTCCGGCCAG ATCGGCGGCG CGGTCGTCCT GGCGATCGTC
ACCGGCCTGA TCGCCGGTCC CGCCGCCACC AGCATCGCGC AGTACAGGCC GGGTCTGTAC
CTGATCGTGA TCGTCGGCGC CGTCGGCCTG CTGGCCGCGG TCAGCGCGCT GCTGTCGGGC
CGCAAGCCCG CGCTGGAAGC CGCGTGA
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| Protein sequence | MLIDVTLTEA KPQPKHVTSP EGPDTPTPHA RRWGPKLWAI LFVAGLAMFL DALDVSMVGV
ALPSIGAELG LDTASLQWIV NGYILGYGGL LLLGGRAADL LGRRKVFLGA LVVFGVASLV
GGLVDHGGLL IASRIVKGVA AAFTAPAALS IITTTFKQGH DRNRALSLFT VFGATGYASG
LIVSGLLTGI DWRLTFFAPV AVVAVVIIAA FFVVPKSSPE HGSIDYAGAV LLTGGMLAAV
YTIVTAPETG FTPLVTATAI AAVAFIGVFL FVQNKVKEPL IRLGIFKIGS IVRANLAALA
IFGSYISFQT VVSLYLQNTL KWDPLQMALA LAPAGVIVAF LSPIAGKFID RFGTKPMIIA
AMGAFVLGYL WFIIRGGDPT PAYFVDYLPS FLLLGLGFAL GFSAVMVQAT DGISDDEQGL
ASGLVQTSGQ IGGAVVLAIV TGLIAGPAAT SIAQYRPGLY LIVIVGAVGL LAAVSALLSG
RKPALEAA
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