Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5606 |
Symbol | |
ID | 8886821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5958042 |
End bp | 5958836 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003514329 |
Protein GI | 291303051 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.231398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.622338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGA TCCGAGGACT GACCAAGAGT TTCACCGGCC AGGACGGTGG CGTCGTGGAG GCGCTGCGCG ACGTCGACCT GGACGTGGCC GAGAACGAGT TCCTGACCGT GCTGGGCCCC AGCGGCTGCG GCAAGACCAC GCTGCTGAAG ATCGTCGCCG GGCTCATCAC CCCCGACGGC GGCCGGATCA GCATCCACGG CGAACCGGTG CGCGGCCCCG GCGAGGACCG CGCCATGGTC TTCCAGAACT TCGCGCTGCT GCCGTGGGCC ACCGTGCTCG ACAATGTCGC GTTCGGACTG AAGATGCGCG GAACCGGTAA GGCCGAACGG GAGGAGCGGG CCCGGGAGCT GATCGCCACC GTGGGGCTGT CCGGGTTCGA GACCAAACGG CCCGGCGAGC TGTCCGGCGG CATGCAGCAG CGGGTCGGCA TCGCCCGGGC GCTGGCGGTG CGGCCCCGGG TGCTGCTGAT GGACGAGCCC TTCGGTGCCG TCGACGAGCA GACCCGGCGG CTGTTGCAGG AGGAGCTGCT GTCCATTTGG GAGGAGAGCC GGCTGACGGT CGTGTTCATC ACCCACAGCA TGGAGGAGGC GGTGCTGCTG GGCGACCGGG TGGTGCTGAT GAGCGCGCGG CCCGGCCAGG TGTCCGAGAT CGTGCCGGTG CCGTTGGAGC GTCCCCGTTC CAGTGACGTC GGCGGGCTGG AGCGTTCGCC CGAGTACGCC GAACTGTCGG CGTACCTGTG GGACCGGCTG CGCGGCATGC ACGCCGAACA CCGTCCGGCC AAGGTGGACG CATGA
|
Protein sequence | MIEIRGLTKS FTGQDGGVVE ALRDVDLDVA ENEFLTVLGP SGCGKTTLLK IVAGLITPDG GRISIHGEPV RGPGEDRAMV FQNFALLPWA TVLDNVAFGL KMRGTGKAER EERARELIAT VGLSGFETKR PGELSGGMQQ RVGIARALAV RPRVLLMDEP FGAVDEQTRR LLQEELLSIW EESRLTVVFI THSMEEAVLL GDRVVLMSAR PGQVSEIVPV PLERPRSSDV GGLERSPEYA ELSAYLWDRL RGMHAEHRPA KVDA
|
| |