Gene Snas_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5606 
Symbol 
ID8886821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5958042 
End bp5958836 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003514329 
Protein GI291303051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.231398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.622338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCCGAGGACT GACCAAGAGT TTCACCGGCC AGGACGGTGG CGTCGTGGAG 
GCGCTGCGCG ACGTCGACCT GGACGTGGCC GAGAACGAGT TCCTGACCGT GCTGGGCCCC
AGCGGCTGCG GCAAGACCAC GCTGCTGAAG ATCGTCGCCG GGCTCATCAC CCCCGACGGC
GGCCGGATCA GCATCCACGG CGAACCGGTG CGCGGCCCCG GCGAGGACCG CGCCATGGTC
TTCCAGAACT TCGCGCTGCT GCCGTGGGCC ACCGTGCTCG ACAATGTCGC GTTCGGACTG
AAGATGCGCG GAACCGGTAA GGCCGAACGG GAGGAGCGGG CCCGGGAGCT GATCGCCACC
GTGGGGCTGT CCGGGTTCGA GACCAAACGG CCCGGCGAGC TGTCCGGCGG CATGCAGCAG
CGGGTCGGCA TCGCCCGGGC GCTGGCGGTG CGGCCCCGGG TGCTGCTGAT GGACGAGCCC
TTCGGTGCCG TCGACGAGCA GACCCGGCGG CTGTTGCAGG AGGAGCTGCT GTCCATTTGG
GAGGAGAGCC GGCTGACGGT CGTGTTCATC ACCCACAGCA TGGAGGAGGC GGTGCTGCTG
GGCGACCGGG TGGTGCTGAT GAGCGCGCGG CCCGGCCAGG TGTCCGAGAT CGTGCCGGTG
CCGTTGGAGC GTCCCCGTTC CAGTGACGTC GGCGGGCTGG AGCGTTCGCC CGAGTACGCC
GAACTGTCGG CGTACCTGTG GGACCGGCTG CGCGGCATGC ACGCCGAACA CCGTCCGGCC
AAGGTGGACG CATGA
 
Protein sequence
MIEIRGLTKS FTGQDGGVVE ALRDVDLDVA ENEFLTVLGP SGCGKTTLLK IVAGLITPDG 
GRISIHGEPV RGPGEDRAMV FQNFALLPWA TVLDNVAFGL KMRGTGKAER EERARELIAT
VGLSGFETKR PGELSGGMQQ RVGIARALAV RPRVLLMDEP FGAVDEQTRR LLQEELLSIW
EESRLTVVFI THSMEEAVLL GDRVVLMSAR PGQVSEIVPV PLERPRSSDV GGLERSPEYA
ELSAYLWDRL RGMHAEHRPA KVDA