Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5595 |
Symbol | |
ID | 8886810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5946236 |
End bp | 5946883 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003514318 |
Protein GI | 291303040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGGG TACTGCTCGC CGACGACGAG AACATGGTCC GCGAAGGCGT CAAGTCCATC CTGACCACCG ACGCCGGCAT CGAGGTGGTG GCCGAGGCCG GCAACGGCCG CGAAGCCGTC GAACTCGCGC GCGCCCACCG GCCCGACGTG GCGCTCATCG ACATCCGGAT GCCGGTGCTG GACGGCCTGG GTGCCCTGGC CGAGCTGCGT CAGGCCGCCC CCGCGACCCG CTGCGTCATG TTGACCACCT TCGACGAGGA CGAGTTCATC GCGCGGGCCC TCGACGCGGG CGCGGCCGGG TTCCTGCTCA AGGCCAGCGA TCCTCGGGAG CTCATCATCG GGGTGCGGGC CGTGGCCGAC GGGGCCGCGT ACCTGTCGCC CCGGGTGGCC GGACGGGTGA TCGCCGAGTT CGACACCGAC CGGCTCACCC GTGGCACCGG CGCGCAGCGC AAGGTCGCGG AGCTGACGCC GCGCGAGAAC GAGGTACTGG GCCTGATCGC CAGCGGCCTG TCGAACCAGG AGATCGGCCG CAGGCTGCAC CTGACCGAGG GGACCGTCAA GGCGCACGTG AGCGCGATCC TGCAACGGCT CGGCGTGCGC AACCGGGTGG AGGCGGCGAT CATCGGCTAC CAGGCGGGCC TGGCCTGA
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Protein sequence | MIRVLLADDE NMVREGVKSI LTTDAGIEVV AEAGNGREAV ELARAHRPDV ALIDIRMPVL DGLGALAELR QAAPATRCVM LTTFDEDEFI ARALDAGAAG FLLKASDPRE LIIGVRAVAD GAAYLSPRVA GRVIAEFDTD RLTRGTGAQR KVAELTPREN EVLGLIASGL SNQEIGRRLH LTEGTVKAHV SAILQRLGVR NRVEAAIIGY QAGLA
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