Gene Snas_5560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5560 
Symbol 
ID8886774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5908276 
End bp5909589 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content67% 
IMG OID 
Productpeptidase M28 
Protein accessionYP_003514284 
Protein GI291303006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAC ACCGATCCCG ATTCGCCATC GCCTTGGGGG CGATGGCCGC CGCCGCAATG 
GCGTTGTCCA TCCTGTCCCC GACCCCGGCC TCGGCGGAGC CCGCCGACGA GGCCACCACG
GCCGCCGCCC CCGACATCAA CGTCGAAGAC GTCAAGACGC ATCTGTCGCA GTTCCAGTCC
ATCGCCAGCT CCAACGGCGG CACCCGGGTC GCCGGTTCCG CCGGTTACGA CCGCTCGGTG
GACTATGTGG CCACCGCGCT GTCCAACGCC GGCTTCCAGG TCACCCGGCA GACGTGCACC
AGCTGCAACG GCTCCGACCA GAACGTGATC GCCGACTGGC CCGGCGGCAA CACCAGCACC
ACCATCATGT TCGGCGCCCA CCTGGACAGC GTTTCGGCCG GGCCCGGCAT CAACGACAAC
GCCTCCGGTT CGGCGGCGCT GCTCGAGGTG GCGCTGACCC TGGCCGAGGT CAAGCCGACC
GTGGCCAAGC ACCTGCGGTT CGCGTGGTGG GCCGACGAGG AGTCGGGCCT GCGCGGCTCG
AACTACTACG TCCGCACCAG TGGCGTCAGC GGCATCCAGG CGTACGTCAA CCTCGACATG
GTCGGCTCGA CCAACGCCGG GTACTTCGTC GACAACATCA ACGGCACATA CAGCGCCCCG
TTCAAGAACT ACTTCAGTTC GGTGGGCCGC GCGGCCGACG AGATGGGCGA ATGCTGTAGC
GACGACGGCC CGTTCCGCAA CGCGGGCGTG CCCACCAGCT TCCTGTCCAC AGGGGCCTCG
GCCCGCAAGA CCACCACCCA GGCACAGAAG TGGGGCGGCA CGGCCGGGCA GTCCTTCGAT
CCCTGTTACC ACCAGCGTTG TGACAGCTAT CCGTCCAATA TCAACGTGAC CGCCATCAAC
CACATGGCCG ACGCCACCGC CTACGGACTG TGGGAACTGG CCGTCGACGA CGACACCCAG
CCACCCGAAG GCTGCGCCAA CACCAATGAC GCCGACGTGG CCATCACCGA CCTGGCCACC
GTCACCTCCA GCCTGGGCAT CGCCGAGTGC GGGCGCCAGG GTGGCACCGC CAGCACCGTG
GAAGTCCACA TCGATCACAC CTGGCGCGGT GATCTCGTCC TGAGACTGCT GGCACCCGAC
GGCACCAGCT ATCTGTTGGA GGACTTCAAC AACAACGACC AGACCGACAA CGTCGACAAG
ACCTACACGG TGAACCTGTC CGGTGAGGCC GCCGACGGCT CCTGGCGATT GTCCGTACAG
GACATAGCCA GGAACGACGT CGGGAAGATC GACACCTGGA CGCTGACCGT CTAG
 
Protein sequence
MPRHRSRFAI ALGAMAAAAM ALSILSPTPA SAEPADEATT AAAPDINVED VKTHLSQFQS 
IASSNGGTRV AGSAGYDRSV DYVATALSNA GFQVTRQTCT SCNGSDQNVI ADWPGGNTST
TIMFGAHLDS VSAGPGINDN ASGSAALLEV ALTLAEVKPT VAKHLRFAWW ADEESGLRGS
NYYVRTSGVS GIQAYVNLDM VGSTNAGYFV DNINGTYSAP FKNYFSSVGR AADEMGECCS
DDGPFRNAGV PTSFLSTGAS ARKTTTQAQK WGGTAGQSFD PCYHQRCDSY PSNINVTAIN
HMADATAYGL WELAVDDDTQ PPEGCANTND ADVAITDLAT VTSSLGIAEC GRQGGTASTV
EVHIDHTWRG DLVLRLLAPD GTSYLLEDFN NNDQTDNVDK TYTVNLSGEA ADGSWRLSVQ
DIARNDVGKI DTWTLTV