| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5547 |
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| Symbol | |
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| ID | 8886761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5894120 |
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| End bp | 5895526 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003514271 |
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| Protein GI | 291302993 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.208469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTAC ACGAAGCAGG CGCGCTGCAC GAGGAGTACA CCGGCGGCCA CGGCCCCGCG
TGGCTGCGGA TGCCCGTCGA CGTCAACGAT CTGATCCCGC AGCTGTGGGC CCGCACCGTC
AACCGTGACG ACGCGGGCGT GCTGACCGTC GGCGGCGTCG ACGTCAACAA GCTGGCCGCC
GAGTTCGGCA CCGCCGCCTA CGTCGTCGAC GAGGCCGACT TCCGGTCCCG GCTGCGCGAC
TTCCGCGGCT CCTTCAGCGC CAACTTCCCG GATGGAGCGG TGTACTACGC CGGGAAGTCG
TTCCTGTGCA AGGCGGTGGC GCGCTGGGTT GCCGAGGAGG GCGTCAACCT CGACATCTGC
ACCGGCGGCG AGCTGGCCAC CGCCGTGGCG GCCGGGTTCC CCGGTGAACG GCTGGCCTTC
CACGGCAACA ACAAGTCCGA GGCCGAACTG GCCGCCGCCC TGGACGCCGG GGTCGGCACC
ATCGTGCTGG ACTCCCGCAT CGAGGTCGAG CGGCTCACCC GGCTGGCCAA GCAGCGCGGC
GTGCGGCCGG GCGTCATGGT GCGCACCAAG GTGGGCGTCG AGGCGCACAC CCACGAGTAC
ATCGCCACCG CGCACGAGGA CCAGAAGTTC GGGCTGTCGC TGGAGGCGGC GGTGAAGGCG
GCCAAGCACA TCCTGGCCGC CGACGTGCTG CACCTGAAGG GCCTGCACTC CCACATCGGT
TCCCAGATCT TCGAGACCAC GGCCTTCGAG GTCGCGGCCC GCCGCGTCAT CGGCGCCCAC
GAGCAGATCC AGCGCGAGAC CGGTAAGACG CTTCCGGAAC TGGGCCTGGG CGGCGGTTTC
GGCATCGCCT ACACCACACA GGACGATCCA CAGTCGCCGA GGCAGCTGGC CGACGGACTG
CGAAAGATCG TCGACCACGA GTGCGACAAC CTCGGCATCG ACATCCCGTC CATCACGGTG
GAACCGGGCC GGGCCATCTC CGGGCCCACC ACGTTCACAC TGTATGAAGT GGGCACCGTC
AAGTCGGTGG ACCTGGGCGC CGGACGGGTG CGCAGCTACG TCAGCGTCGA CGGCGGCATG
AGCGACAACA TCCGCACCGC CATGTACGGC GCGACCTATT CGGTCACACT GGCCTCGCGG
CTGTCGGACG CGCCGCCGAT CCTGGGCCGG GTCGTGGGCA AACACTGCGA GGCCGGAGAC
ATCATCGTGC GGGACGAGTT CCTGCCCGGC GACATCAAAC CCGGTGACCT GATCGCGGTG
CCCGGCACCG GCGCCTACTG CCGCAGCATG GCCAGCAACT ACAACCACGT CCCCCGGCCG
CCGGTGGTCG CGGTCGCCGA CGGGACGGCG CGGCTCATCG TCCGCGGCGA GTCCGTCGAC
GATCTGCTCA ATCTGGACGT CGGCTGA
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| Protein sequence | MRVHEAGALH EEYTGGHGPA WLRMPVDVND LIPQLWARTV NRDDAGVLTV GGVDVNKLAA
EFGTAAYVVD EADFRSRLRD FRGSFSANFP DGAVYYAGKS FLCKAVARWV AEEGVNLDIC
TGGELATAVA AGFPGERLAF HGNNKSEAEL AAALDAGVGT IVLDSRIEVE RLTRLAKQRG
VRPGVMVRTK VGVEAHTHEY IATAHEDQKF GLSLEAAVKA AKHILAADVL HLKGLHSHIG
SQIFETTAFE VAARRVIGAH EQIQRETGKT LPELGLGGGF GIAYTTQDDP QSPRQLADGL
RKIVDHECDN LGIDIPSITV EPGRAISGPT TFTLYEVGTV KSVDLGAGRV RSYVSVDGGM
SDNIRTAMYG ATYSVTLASR LSDAPPILGR VVGKHCEAGD IIVRDEFLPG DIKPGDLIAV
PGTGAYCRSM ASNYNHVPRP PVVAVADGTA RLIVRGESVD DLLNLDVG
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