| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5544 |
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| Symbol | |
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| ID | 8886758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5890378 |
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| End bp | 5891769 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003514268 |
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| Protein GI | 291302990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.258636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.142482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTTGA CTCATCCACC GTCCGCACTC ATCGACGGCT CGCCCCGGCT GCGGCTACGG
TCGCCGCCCA CGTACTGGCG CTGTGAACCG TCCTGGGTGT GGCAGGCGCG GCCGCTGACC
GACCATCTGC TGTGGCATGT GCACGACGGC GCCGGGGAGC TGCGGCTCGA CGACAGGCAC
GTGCGGCTGC GGCCGGGGTT CTGCGCGGTG TTCGCGCCCG GCGACGCGCC GGTGGCCACC
CACGATCCGC GACATCCGCT GCTGGTCTTC GGCATGCACT TCACCGCCAC GGGCTTCGAC
GGCGATCTGG TCCCCGAGCA ACGCTGGTGC CGGTTGTGGG ACCAGGAGTT CGCCGTCCGG
CTGGCGCGGC ACTGCGACTA CGCCCACCGA CGCGGCGACG ACCTCGGGCA GCGGCAGGCG
GTGCTCGGCC TGGAACAGTT CCTCTGTCTA TTGTGGGATA ACGTGACGCG TCCAGCTCCC
GGCCCCGGGG ACGCCGCCGT CGAGGACATC GCCCGGGCGG TCCGGCAGGA ACCCAGCCGC
GACTGGACCG TCGCGACGCT CGCCAAGCGG GCCAACCTTT CCCGTGCCCA GTTCACCCGC
CGCTTCACCG CCCACACCGG CTACTCCCCC GCGCGGTACG TGATCCGGGC CCGGCTCGAC
CGGGCCCGGC AGCTGTTGAC CGAGACCAAC ATGTCCGTCG GCCAGGTCGC CGCCACCCTG
GGGTACCCCG ACGTCGGTTA TTTCAGTCGC CAGTACAAAG TCCACACCGG TTCCTCACCC
AGTAGGGATC GCGGTGGCGG CGAAACTTCC GTAGATTGGT TAATGCGGGT ACCAACAGTG
CCGTTGTCCC CTAACATCCA GGGGCGATCA GACTATAGGA GCCGCAGCGT GATCACGGAA
TACCAAGCGC CCAACGGCTT CGCCACCATC CCCAGACAAC GGTCCCTTCG AGAACACCCC
CTGATCGCCG CGTTGTTGTC CCTCGAACTC GATCCCCGTG ACTACGTCAT CTTCGGCAGC
GGGCCGCTGC TGGCCCACGG GTTGCGCGCG GACGTCGCCG ACCTGGACGT CGTCGCCCGA
GGACGGGCCT GGCACCGGGC ACTGCGGATG TCCGGCTACT CCATCGATCT GGGACCGCAC
AGCTTCGAGC TCATGCTGCG GTTCTTCGGC GGCGGCGTCG AGATCTCCGC CTACTGGACC
GACACCAGCT GGGACGTCGA CGCGCTCATC GACACCGCCG AGATCATCGA CGGACTCCGG
TTCGCCGCGC TGCGGGATGT GCTGGAGTAC AAGCGAACCC TCGATCGCGC CAAGGACCGC
GCCGATGTCG CCGCCCTGGA GCGACACCTG TCCACGGCGG AAGAACTCGA ACCGGTGCTG
TGCGCGGCCT GA
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| Protein sequence | MFLTHPPSAL IDGSPRLRLR SPPTYWRCEP SWVWQARPLT DHLLWHVHDG AGELRLDDRH
VRLRPGFCAV FAPGDAPVAT HDPRHPLLVF GMHFTATGFD GDLVPEQRWC RLWDQEFAVR
LARHCDYAHR RGDDLGQRQA VLGLEQFLCL LWDNVTRPAP GPGDAAVEDI ARAVRQEPSR
DWTVATLAKR ANLSRAQFTR RFTAHTGYSP ARYVIRARLD RARQLLTETN MSVGQVAATL
GYPDVGYFSR QYKVHTGSSP SRDRGGGETS VDWLMRVPTV PLSPNIQGRS DYRSRSVITE
YQAPNGFATI PRQRSLREHP LIAALLSLEL DPRDYVIFGS GPLLAHGLRA DVADLDVVAR
GRAWHRALRM SGYSIDLGPH SFELMLRFFG GGVEISAYWT DTSWDVDALI DTAEIIDGLR
FAALRDVLEY KRTLDRAKDR ADVAALERHL STAEELEPVL CAA
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