Gene Snas_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5483 
Symbol 
ID8886697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5823502 
End bp5825463 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRadical SAM domain-containing protein 
Protein accessionYP_003514207 
Protein GI291302929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAA CCTCCGTATA TCCGCAGCTT GAATCGCTGC TGCCTCAGGT GGGCAAGCCT 
ATCCAGTACG TCGGCGGTGA GCTGGGGGCT GTCGTCAAGG ACTGGGACGA GGCTACGGTG
CGCTGGGCGC TGATGTACCC CGACGCTTAC GAGGTCGGTG TTCCGAACCA GGGTATCCAG
ATTCTCTACG AGGTGCTCAA CGAACGCGCC GACGCGTTGG CCGAGCGCAC CTATTCGGTG
TGGCCGGATC TGGAGAAACT GATGCGGGAG AACGATGTCC CGCAGTTCAC CGTCGACGCG
CACCGTCCGG TGGGCGCCTT CGACGCCTTC GGGGTCTCGT TCGCCACCGA GATGGGCTAC
ACGAACCTGC TCACCGCGCT GGACCTGGCG GGCATTCCGC TGTCGGCGGC CGACCGGGAC
GAATCCCACC CGGTCGTGGT GGCCGGTGGC CACGCGGCCT TCAACCCGGA GCCGATCGCC
GAGTTCATCG ACGCCGCGGT GCTGGGCGAC GGCGAGGAGG CCGTCGGCGA GATCACCGAC
ATCATCCGGG ACTGGAAGAA CGAGGGCCGT CCCGGTGGCC GCGACGAACT GCTGCTGCGC
CTGGCCCGCA CCGAGAGCAT CTACGTCCCC CGCTTCTACG ACGTCGACTA CCTTCCCGAC
GGCCGGATCC GGCGAGTGGT CCCCAACCGC GCCGACGTCC CGTTCCGGGT CCACAAGCGA
ACCACAATGG ACCTCGACGC CTGGCCGTAC CCGAAGAAGC CGCTGGTGCC GCTGGCCGAG
AGCGTGCACG AACGCTACGC GGTGGAGATC TTCCGCGGCT GTACCCGTGG CTGCCGGTTC
TGCCAGGCGG GCATGATCAC CCGCCCGGTG CGGGAACGCT CCATCACCAC CATCGGCGAG
ATGGTCCACA AAGGCATCGA GGAGTCGGGC TTCAACGAGG TCGGGCTGCT GTCGCTGTCC
AGCGCCGACC ACTCCGAGAT CGCCGACGTG TGCTCGGGCC TGGCCGACCG CTACGAGGGC
GAGAACGTCT CGCTGTCGCT GCCGTCCACC CGCGTCGACG CCTTCAACGT CGACCTCGCC
AACGAACTGT CCCGCAACGG ACGCCGCTCC GGCCTGACCT TCGCCCCCGA GGGCGGCAGC
GAACGCATCC GCCGCGTCAT CAACAAGATG GTCAGCGAGG AAGACCTCAT CAACACCGTC
GTCACGGCCT ACGGCAACGG TTGGCGGCAG GTGAAGCTGT ACTTCATGTG CGGCCTGCCC
ACCGAGACCG ACGAGGACGT CGTCGGCATC GCCGACATGG CGCACAAGGT GATCAAGGCC
GGACGCACGG CCTCCGGCCG CAGCGACATC CGCTGCACCG TCTCCATCGG AGGGTTCGTT
CCGAAGCCGC ACACCCCGTT CCAGTGGGCC GCCCAGACCG ACGCCGAGAC CGTCGACCGG
CGGCTGAAGT TGCTCAAGGA CGCCATCAAC TCCGAGAAGT CCCTGGGCCG CGCCATCGGT
TTCCGCTACC ACGACGGCCG CCCCTCGCTC ATCGAGGGAC TGCTGTCGCG CGGCGACCGC
CGCCTGTCGG GCGTCATTCG CAAGGTGTGG GAGGAGGGCG GTCGCTTCGA CGGCTGGAGC
GAACACTTCT CCTACGAGCG CTGGTACGAC GCCGCCGAGG CCGTCCTGCC CGAACACGGC
GTCTCGTTCG CCTGGTACAC CACCCGCGAA CGCGACGAGA ACGAAGTGCT GCCCTGGGAC
CACCTCGACT CCGGCCTCGA CAAGGACTGG CTGTGGTCGG ACTGGCAGGA CGCGATCTCC
GAGGTCGAAC TCGACGACTG CCGCTGGACC CCGTGCTTCG ACTGCGGCGT CTGCCCCGCC
ATGGACACCG AGATCCAGAT CGGCCCCACC GGCAGGAAGC TGCTGCCGTT GAGCGTCGCG
GGCGCCGACT CCCGTCCGGT CTCGGCGGTG AGCGGACAGT GA
 
Protein sequence
MSVTSVYPQL ESLLPQVGKP IQYVGGELGA VVKDWDEATV RWALMYPDAY EVGVPNQGIQ 
ILYEVLNERA DALAERTYSV WPDLEKLMRE NDVPQFTVDA HRPVGAFDAF GVSFATEMGY
TNLLTALDLA GIPLSAADRD ESHPVVVAGG HAAFNPEPIA EFIDAAVLGD GEEAVGEITD
IIRDWKNEGR PGGRDELLLR LARTESIYVP RFYDVDYLPD GRIRRVVPNR ADVPFRVHKR
TTMDLDAWPY PKKPLVPLAE SVHERYAVEI FRGCTRGCRF CQAGMITRPV RERSITTIGE
MVHKGIEESG FNEVGLLSLS SADHSEIADV CSGLADRYEG ENVSLSLPST RVDAFNVDLA
NELSRNGRRS GLTFAPEGGS ERIRRVINKM VSEEDLINTV VTAYGNGWRQ VKLYFMCGLP
TETDEDVVGI ADMAHKVIKA GRTASGRSDI RCTVSIGGFV PKPHTPFQWA AQTDAETVDR
RLKLLKDAIN SEKSLGRAIG FRYHDGRPSL IEGLLSRGDR RLSGVIRKVW EEGGRFDGWS
EHFSYERWYD AAEAVLPEHG VSFAWYTTRE RDENEVLPWD HLDSGLDKDW LWSDWQDAIS
EVELDDCRWT PCFDCGVCPA MDTEIQIGPT GRKLLPLSVA GADSRPVSAV SGQ