| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5481 |
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| Symbol | |
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| ID | 8886695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5820349 |
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| End bp | 5822502 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | ribonuclease Rne/Rng family |
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| Protein accession | YP_003514205 |
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| Protein GI | 291302927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0824918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG ACGATTCCAA TCGGCAGCGG GTTCAGCCCG CGCCCCTTCT GTTCGTCGCT
CCGCAAGCCC AGGCGGCCCC ACCGCCGCCG GCGCGCACCG AGAGCGACTC CACCGAGACC
GAGGAGACCG GGGTGAAGCG GCGCCGCCGC TCCCGGTCCC GCAGCGGTGG CGGCAACGAA
GCGGCCGAGG CCGAGGAAAC CCAGCAGACC GACGACGAGC CCCAGGCCCC GACCCGGCGC
CGCACCCGCA AACGCGGCGC CGAGCGTGAG ACCGCCGCCC CCGAGGCCGC CGAGCCCGAA
GCCGAGGACG ACGGCGACGA CGACGAGACC GCCCGCGGCA AACGCGGCCG CCGGGGCCGT
CGCGGCCGGG GCCGTGGCAA GGGCACCGGC GCCGACGGCG GCGACACCGA GGACACGCCG
GGTCAGGACG ACGACGAGCA GCAGCCCGCC GCCGACACCG ACGCCGACGG GGTGACACGC
CGACGTCGCC GCCAGCGCAA ACGCGCGGGC AGCGCGAGCG ACAAGAGCGC CGCCGACAGC
GACGGCAAGA CCGAGGTCGT GGTCAAGGTC CGCAAGGCCC GCGAGGTCTC CGGCGACGAC
GTCCAGGGCC TGTCCGGCTC CACCCGGCTG GAGGCCAAAC GGCAGCGCCG TCGCGAAGGC
CGTGGCCAGC GCCGCACCCG CCCGCAGGTC ATCAGCGAAT CCGAGTTCCT GGCCCGCCGC
GAATCCGTGG CCCGCACCCT GGTGGTGCGC GGACACGGCG ACCGCACCCA GATCGCGGTC
CTGGAGGACG ACCTGCTCGT CGAGCACTTC GTCACCCGCG CGGGCGGCCA GGGCATGGCG
GGCAACGTCT ACCTGGGCAA GGTCCAGAAC ATCCTGCCCA GCATGGAGGC CGCGTTCATC
GACATCGGCC GGGGCCGCAA CGCCGTCCTG TACGCGGGCG AGGTCAACTG GGACCGCACC
GGCCTGTCGG GACGCACCCG CACCATCGAG CAGGCCATGA ACGCCGGCGA CTCGGTGCTG
GTCCAGGTCA CCAAGGACCC GGTCGGCCAC AAGGGCGCCC GCCTGACCAG CCACATCGCG
CTGTCCGGCC GCCACCTCGT CTACGTGCCG CACGGCAACG CCTCGGGCAT CTCGCGCAAG
CTCCCGGACT CCGAGCGCCG ACGGCTGCGC AGCACGCTCA AGAAGCTCGT CCCCGAGGGC
GCGGGCGTCA TCGTCCGCAC CGCGGCCGAG GGCGCCGACA CCGACGACCT CGAACGCGAC
ATCGCCAGGT TGCAGAGCGA GTGGGAGGCC ATCGAGGCCA AAGCGGCGAA GGGCGGCGCC
CCGGCATTGC TGCACGCCGA ACCCGACCTG CTCGTCCGCG TCGTCCGCGA CGTCTTCAAC
GAGGACTTCA ACGAGGTCAT CGTCGACGAC GACGCCGCCT ACGCCGAGGT CGAGAAGTAC
CTCAGCTCCG TCTCGCCCGA CCTGGTGTCC CGGCTGAAAC GGCACACCGG CACCGGCGAC
ATCTTCGCCG AACAGCGCGT CGACGAACAA CTGCTCAAGG CGCTGGACCG CAAGGTGTTC
CTGCCCTCGG GCGGTAGCCT CGTCATCGAC CGCACCGAGG CGATGACGGT CATCGACGTC
AACACCGGCA AGTTCACCGG CGCGGGCGGC AACCTCGAGG AGACCGTCAC CCGCAACAAC
CTGGAGGCGG CCGAGGAGAT CGTCCGGCAG CTGCGGCTGC GCGACATCGG CGGCATCATC
GTCATCGACT TCATCGACAT GGTGCTGGAG AGCAACCGGG ATCTGGTGCT GCGGCGCCTG
ACCGAATGCC TCGGCCGGGA CCGCACCAAG CACCAGGTCA CCGAGATCAC CTCGCTCGGG
CTGGTCCAGA TGACCCGCAA ACGCGTGGGT CAGGGCCTGC TCGAGGCCTT CAGCGAACCC
TGCGAACACT GCAAGGGCCG CGGTGTCATC GTCGACACCG ACCTGTCGGG CAACTTCGCC
AACGCCAAAC CGGAGAAGAG CAACAACGGC AAGGCCGAGG GCAAGAGCGG CAAGAAGAAG
GAAAGCAAGA ACGCCAACAA GGGAAAGTCC GTCAGCGAGG TGGCCAAATC GGCCGCTGAG
CAGACCCGCA AGATCGCCGA GGCCAGCACC ACGAACGGTC AAGCGGCGGC TTGA
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| Protein sequence | MHDDDSNRQR VQPAPLLFVA PQAQAAPPPP ARTESDSTET EETGVKRRRR SRSRSGGGNE
AAEAEETQQT DDEPQAPTRR RTRKRGAERE TAAPEAAEPE AEDDGDDDET ARGKRGRRGR
RGRGRGKGTG ADGGDTEDTP GQDDDEQQPA ADTDADGVTR RRRRQRKRAG SASDKSAADS
DGKTEVVVKV RKAREVSGDD VQGLSGSTRL EAKRQRRREG RGQRRTRPQV ISESEFLARR
ESVARTLVVR GHGDRTQIAV LEDDLLVEHF VTRAGGQGMA GNVYLGKVQN ILPSMEAAFI
DIGRGRNAVL YAGEVNWDRT GLSGRTRTIE QAMNAGDSVL VQVTKDPVGH KGARLTSHIA
LSGRHLVYVP HGNASGISRK LPDSERRRLR STLKKLVPEG AGVIVRTAAE GADTDDLERD
IARLQSEWEA IEAKAAKGGA PALLHAEPDL LVRVVRDVFN EDFNEVIVDD DAAYAEVEKY
LSSVSPDLVS RLKRHTGTGD IFAEQRVDEQ LLKALDRKVF LPSGGSLVID RTEAMTVIDV
NTGKFTGAGG NLEETVTRNN LEAAEEIVRQ LRLRDIGGII VIDFIDMVLE SNRDLVLRRL
TECLGRDRTK HQVTEITSLG LVQMTRKRVG QGLLEAFSEP CEHCKGRGVI VDTDLSGNFA
NAKPEKSNNG KAEGKSGKKK ESKNANKGKS VSEVAKSAAE QTRKIAEAST TNGQAAA
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