Gene Snas_5478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5478 
Symbol 
ID8886692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5818117 
End bp5819559 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content70% 
IMG OID 
ProductGTP-binding protein Obg/CgtA 
Protein accessionYP_003514202 
Protein GI291302924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.587105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCCT TCGTCGACCG CGTGGTCCTG CATGTCCAGG CGGGCACCGG TGGCCACGGC 
TGCGTGTCGA TCCACCGGGA AAAGTTCAAA CCCTTCGGTG GGCCGGACGG AGGAAACGGC
GGCCATGGCG GCGACGTCGT CCTGGAGGTC GACCCCAACG TCCACACGCT GCTGGACTTC
CACTTCCACC CGCACGCCAA GGCGGGCAAC GGCAAGGGCG GCCAGGGTTC CAACCGCAAC
GGCGCCTTCG GCAAGAGCCT GCACCTCAAG GTCCCCGACG GCACCGTGGT GCAGTCCGCC
GACGGCGAGG TCATCGCCGA CCTCACCGGC GTAGGCACCA GCATCGTGCT CGCCCGTGGC
GGCCGTGGCG GACGCGGCAA CGCCGCCCTG GCCAACGCCG CCCGCAAGGC CCCCGGCTTC
GCCGAACTCG GCGAGGAGGG TGAAGCCCTC GACGCGGTCC TGGAACTCAA GAGCGTCGCC
GACGTCGGCC TGGTCGGCTT CCCCTCGGCG GGCAAGTCCT CGCTGATCGC CGCGCTGTCG
GCGGCCCGCC CCAAGATCGC CGACTACCCG TTCACGACCC TGGTCCCCAA CCTCGGCGTC
GTCTCGGCGG GCGAGACCAC CTTCACCATC GCCGACGTCC CGGGCCTGAT TCCCGGTGCG
GCACACGGCA AAGGGCTCGG CCTGGAATTC CTGCGCCACA TCGAGCGCTG CGCGGTCCTG
GCCCACGTCG TCGACTGCGC CACCCTGGAA CCCGGCCGCG ACCCGCTGTC GGACATCGAC
GCGCTCGAAC ACGAACTCGC CGAGTACGGC GGACTCACCG ATCGCCCCCG CATCGTCGTG
CTCAACAAGA TCGACGTGCC CGAGGCCGCC GAACTCGCCG AACTGGTGCG CGCGGACGTC
GAGACCCGTG GCTGGCCGGT GTACGAGGTC AGCGCCGTTG CCCGCAAGGG TCTATCCACA
TTGACCTACG CGCTGGCCGC CGCCGTCACC GCCCACCGTG AGTCCCAGCC CCGTCCCGAA
CCCACCCGGA TCGTGCTGCG CCCCCAGGGA GTCGACGACT CCGGTTTCGA GATCAAGGAA
ACCAAGGACG GCGTGTTCCA CATCACCGGC GCCAAACCGG AACGCTGGGT GCGGCAGACC
GACTTCAGCA ACGACGAGGC CGTCGGCTAC CTGGCCGACC GGCTCGCCAA GATCGGCGCC
GAGACCGCGC TCGCCAAGGC GGGGGCCACC CCCGGCTGTC TGGTGCGCAT CGGCGCGGTC
GAGTTCGAGT GGGAACCCAC CGACCCGGCG ACCATCGCGA TGAGCGGCCC TCGCGGCACC
GACCCCCGGT TCGAAACCGA CAACCGAGTC TCGGCGGCCG ATCGGCTTGC CGCCCGCAAG
GCCCGCCGCG CGACGACCGA GGAACCCGAC TCCGAGGACG ACGCCGAAGA AGATCCGTCC
TGA
 
Protein sequence
MSSFVDRVVL HVQAGTGGHG CVSIHREKFK PFGGPDGGNG GHGGDVVLEV DPNVHTLLDF 
HFHPHAKAGN GKGGQGSNRN GAFGKSLHLK VPDGTVVQSA DGEVIADLTG VGTSIVLARG
GRGGRGNAAL ANAARKAPGF AELGEEGEAL DAVLELKSVA DVGLVGFPSA GKSSLIAALS
AARPKIADYP FTTLVPNLGV VSAGETTFTI ADVPGLIPGA AHGKGLGLEF LRHIERCAVL
AHVVDCATLE PGRDPLSDID ALEHELAEYG GLTDRPRIVV LNKIDVPEAA ELAELVRADV
ETRGWPVYEV SAVARKGLST LTYALAAAVT AHRESQPRPE PTRIVLRPQG VDDSGFEIKE
TKDGVFHITG AKPERWVRQT DFSNDEAVGY LADRLAKIGA ETALAKAGAT PGCLVRIGAV
EFEWEPTDPA TIAMSGPRGT DPRFETDNRV SAADRLAARK ARRATTEEPD SEDDAEEDPS