Gene Snas_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5471 
Symbol 
ID8886682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5805619 
End bp5806296 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_003514195 
Protein GI291302917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGTC GCGTCGCGGG CCTGCTCGGC CTCACCGGCT CCCGGTTCCT GCTGGCGGGC 
CGCACCCGCG GCGTGCTGGT CATGCTGCTG CTCATCGTGG CGGTCACGGC CGGAGCGCTG
ACCTGGTTCT CATGGCCCAG CCCGCAACCG GCCCCGGGGG CAGTCGCGGT GGCCCAAACC
AACGACGGCG ACGGCGGCGC GGTCGGCCGC CTCAAGGTCT CGGTCGTGGG TGACGTCTCC
GAACCCGGCA TCGTCGAGCT GGCGGCGGGC GCCCGGGTAG CCGACGCCAT CGAAGCGGCG
GGCGGTCTGA CACCCGAATC GGCGTCCCCC GGCTACCTCA ATCTGGCCCG CAAGGTCAAG
GACGGCGAAC TGATCGTGGT CGAAGCCGAG GGCGAGAATC CCGACGACCC CGAAGCTCCG
GCCGAGCCCG ACCCGTCCGA AGAGCCGCCC ACGGGCGAAA CCCCCGACGA CCCCAACGCA
CCGGGCGAAC CGGTCAATCT CAACAAGGCC ACAGAAGACG AACTCGCCAC GCTGCCGGGC
ATCGGCCCGG TCACGGCGGC CAGCATCGTC GAATACCGCG AACAAAGCGG CGGCTTCGAC
TCGGTCGACC AGCTCACCGA GGTCGATGGC ATCGGTCCAG CCACACTGGA CAAGCTCGCC
GACAAGGTAA CCGTGTGA
 
Protein sequence
MRGRVAGLLG LTGSRFLLAG RTRGVLVMLL LIVAVTAGAL TWFSWPSPQP APGAVAVAQT 
NDGDGGAVGR LKVSVVGDVS EPGIVELAAG ARVADAIEAA GGLTPESASP GYLNLARKVK
DGELIVVEAE GENPDDPEAP AEPDPSEEPP TGETPDDPNA PGEPVNLNKA TEDELATLPG
IGPVTAASIV EYREQSGGFD SVDQLTEVDG IGPATLDKLA DKVTV