Gene Snas_5456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5456 
Symbol 
ID8886667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5787816 
End bp5788838 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_003514181 
Protein GI291302903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG ACGATCGCAA ACTCGACGTT CTGCGGGCCA TCATCGAGGA CTACGTGACG 
ACGAAGGAAC CCGTCGGCAG CAAATCGCTG GTGCACCGGC ACGCGCTCGG GGTCTCCTCG
GCGACCATTC GCAATGACAT GGCCGTGCTC GAGGAGGAGG GCTACATCCG CCAGCCCCAC
ACGAGCGCCG GTCGGGTGCC GACCAACCGG GGCTACCGGT TGTTCGTCGA CCGGCTCAGC
AAGATCAAAC CGTTGACGGC CGCCGAACGG CGCGCCGTGC ACCGGTTCCT CGACGACGCC
GTCGACCTCA ACGACGTGGT GCACCGGACG GTGCGGCTGC TGGCACAGCT GACCCGCCAG
GTCGCCGTCG TCCAGTACCC GAGCCTGTCG CGCAGCAGCG TCCGGCACCT GGAACTGGTG
CCGCTGGTCG CCAACCGGCT GATGCTGGTG ATGATCACCG ACACCGGCCG GGTCGAGCAA
CGCGTGGTGG ATCTGCCCGA GGATCTGCCC GAAGAGGACG TCCTGACGCT GCGCACCCAG
ATCAACGACA AACTGGTGGG CATCCGGCTC ACCGAGACCC CCACCCAGGT ACGCACCCTG
GTGGAGGAGG CCTCACCGCA GCTGCGGCCC GCGATGACCG CGCTGTCGAC GGTGCTGCTG
GAGACCCTGG TGGAACGCGG CGAGGAACGC ATCGCGGTGG CCGGGACGGC CAGCCTGACG
CTGCACGCCG TCGACTTCGC CGGTTCGCTG CGGCCGATCC TGGAGGCACT GGAGGAAGAA
GTCGTCCTGC TGAAGCTGCT GGGCGAGATC GACTCGGGCT CCACCCTGAA CATCTGCATC
GGGGAGGAGA ACAAGATCGC GGGACTGGAC GGCACCTCCG TGGTGAGCAC CGGGTATGGT
CCCGCTGGTT CGGTCGTGGG CGGCCTGGGC GTCGTCGGAC CGACGAGGAT GGACTACCCC
GGTACGATCG CCGCGGTGCG GACGGTGGCG AGGTATGTCA GCCAGATCCT CGCGCAGAAC
TGA
 
Protein sequence
MTMDDRKLDV LRAIIEDYVT TKEPVGSKSL VHRHALGVSS ATIRNDMAVL EEEGYIRQPH 
TSAGRVPTNR GYRLFVDRLS KIKPLTAAER RAVHRFLDDA VDLNDVVHRT VRLLAQLTRQ
VAVVQYPSLS RSSVRHLELV PLVANRLMLV MITDTGRVEQ RVVDLPEDLP EEDVLTLRTQ
INDKLVGIRL TETPTQVRTL VEEASPQLRP AMTALSTVLL ETLVERGEER IAVAGTASLT
LHAVDFAGSL RPILEALEEE VVLLKLLGEI DSGSTLNICI GEENKIAGLD GTSVVSTGYG
PAGSVVGGLG VVGPTRMDYP GTIAAVRTVA RYVSQILAQN