Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5456 |
Symbol | |
ID | 8886667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5787816 |
End bp | 5788838 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_003514181 |
Protein GI | 291302903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGG ACGATCGCAA ACTCGACGTT CTGCGGGCCA TCATCGAGGA CTACGTGACG ACGAAGGAAC CCGTCGGCAG CAAATCGCTG GTGCACCGGC ACGCGCTCGG GGTCTCCTCG GCGACCATTC GCAATGACAT GGCCGTGCTC GAGGAGGAGG GCTACATCCG CCAGCCCCAC ACGAGCGCCG GTCGGGTGCC GACCAACCGG GGCTACCGGT TGTTCGTCGA CCGGCTCAGC AAGATCAAAC CGTTGACGGC CGCCGAACGG CGCGCCGTGC ACCGGTTCCT CGACGACGCC GTCGACCTCA ACGACGTGGT GCACCGGACG GTGCGGCTGC TGGCACAGCT GACCCGCCAG GTCGCCGTCG TCCAGTACCC GAGCCTGTCG CGCAGCAGCG TCCGGCACCT GGAACTGGTG CCGCTGGTCG CCAACCGGCT GATGCTGGTG ATGATCACCG ACACCGGCCG GGTCGAGCAA CGCGTGGTGG ATCTGCCCGA GGATCTGCCC GAAGAGGACG TCCTGACGCT GCGCACCCAG ATCAACGACA AACTGGTGGG CATCCGGCTC ACCGAGACCC CCACCCAGGT ACGCACCCTG GTGGAGGAGG CCTCACCGCA GCTGCGGCCC GCGATGACCG CGCTGTCGAC GGTGCTGCTG GAGACCCTGG TGGAACGCGG CGAGGAACGC ATCGCGGTGG CCGGGACGGC CAGCCTGACG CTGCACGCCG TCGACTTCGC CGGTTCGCTG CGGCCGATCC TGGAGGCACT GGAGGAAGAA GTCGTCCTGC TGAAGCTGCT GGGCGAGATC GACTCGGGCT CCACCCTGAA CATCTGCATC GGGGAGGAGA ACAAGATCGC GGGACTGGAC GGCACCTCCG TGGTGAGCAC CGGGTATGGT CCCGCTGGTT CGGTCGTGGG CGGCCTGGGC GTCGTCGGAC CGACGAGGAT GGACTACCCC GGTACGATCG CCGCGGTGCG GACGGTGGCG AGGTATGTCA GCCAGATCCT CGCGCAGAAC TGA
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Protein sequence | MTMDDRKLDV LRAIIEDYVT TKEPVGSKSL VHRHALGVSS ATIRNDMAVL EEEGYIRQPH TSAGRVPTNR GYRLFVDRLS KIKPLTAAER RAVHRFLDDA VDLNDVVHRT VRLLAQLTRQ VAVVQYPSLS RSSVRHLELV PLVANRLMLV MITDTGRVEQ RVVDLPEDLP EEDVLTLRTQ INDKLVGIRL TETPTQVRTL VEEASPQLRP AMTALSTVLL ETLVERGEER IAVAGTASLT LHAVDFAGSL RPILEALEEE VVLLKLLGEI DSGSTLNICI GEENKIAGLD GTSVVSTGYG PAGSVVGGLG VVGPTRMDYP GTIAAVRTVA RYVSQILAQN
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