Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5336 |
Symbol | |
ID | 8886545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5665195 |
End bp | 5666238 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transport system permease protein |
Protein accession | YP_003514063 |
Protein GI | 291302785 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.395947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCA CGACGTCGCC CAAGGCGGCC GCCGCCGCCC CGGCGCGATC GCCGGTGTCG CGCGGCACCT GGCTGCTGGC GCTCACCGGG GTGCTGGCGG TGCTGTGCCT GCTGTCGATC ATGCTCGGCA GCCGGGCGAT CGGCGCGGGC ACCGTGCTGG ACGCGCTGGC GGGCGACGGC GACGCGCAGA CCGTCGCGAT CGTGTGGGAC GTCCGGATTC CCCGCACCGC GATGGCACTG CTGGTCGCCG CCGGACTGGG CATGGCCGGG GTGCTGATGC AGGCCCTGAC CCGCAACCCG CTGGCCGACC CGGGACTGCT CGGCGTCACC GCCGGCGCCG CCTTCGCGAT CGTGATCTCG GTGGCGTTCT TCGGCATCGC CTCGATGCTC GGCTTCATCT GGACCGGCTT CGGCGGCGCG CTGGTGGCCG GGCTGGTGGT GTACCTGCTG GGCGGCGTGG GACGCGGCGG CGCCACCCCG GTAAAGCTCG CCGTCGCGGG CGTCGCCGTC TCGGCGCTGC TGAGCGCGCT GACCAGCGGC ATCGTGCTGA CCGACACCAA CGCGCTCAAC CGGTACCGCT ACTGGGCCGC CGGATCGCTT GCCGGTCAGG ACACCGAGGT ACTGCTCCAG ATCGCGCCGT TCCTGCTGGT GGGCATGGTG GTGGCGCTGT CGCTGGCGTC CTCGCTCAAC AGCCTCGCCC TGGGCGACCG GGTCGCGAAA TCACTGGGCC GCCGCGTCGG ACTGATCCGG CTCACCGGAG CCGTGGTCGT GACCCTGCTG ACCGGCGCCT GCGTCGCGGT GTGCGGCCCG ATCGTCTTCG TCGGACTCAT CGTCCCGCAC GTCGCCCGGG CCATCACCGG ACCCGACTAC CGCTGGATGC TGGGCTACAC ACTGGTCCTG GCACCGATAC TCATGCTCGC CGCCGACATC ACCGGCCGCG TCATCGCCCG CCCCACCGAG GTCAACGTCG GCGTGGTGCT GGCCTTCATC GGCGGCCCGT TCTTCATCGC CCTGGTGCGC CGCCGTCGAC TGGCGGAGCT GTGA
|
Protein sequence | MSVTTSPKAA AAAPARSPVS RGTWLLALTG VLAVLCLLSI MLGSRAIGAG TVLDALAGDG DAQTVAIVWD VRIPRTAMAL LVAAGLGMAG VLMQALTRNP LADPGLLGVT AGAAFAIVIS VAFFGIASML GFIWTGFGGA LVAGLVVYLL GGVGRGGATP VKLAVAGVAV SALLSALTSG IVLTDTNALN RYRYWAAGSL AGQDTEVLLQ IAPFLLVGMV VALSLASSLN SLALGDRVAK SLGRRVGLIR LTGAVVVTLL TGACVAVCGP IVFVGLIVPH VARAITGPDY RWMLGYTLVL APILMLAADI TGRVIARPTE VNVGVVLAFI GGPFFIALVR RRRLAEL
|
| |