Gene Snas_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5336 
Symbol 
ID8886545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5665195 
End bp5666238 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID 
Producttransport system permease protein 
Protein accessionYP_003514063 
Protein GI291302785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.395947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CGACGTCGCC CAAGGCGGCC GCCGCCGCCC CGGCGCGATC GCCGGTGTCG 
CGCGGCACCT GGCTGCTGGC GCTCACCGGG GTGCTGGCGG TGCTGTGCCT GCTGTCGATC
ATGCTCGGCA GCCGGGCGAT CGGCGCGGGC ACCGTGCTGG ACGCGCTGGC GGGCGACGGC
GACGCGCAGA CCGTCGCGAT CGTGTGGGAC GTCCGGATTC CCCGCACCGC GATGGCACTG
CTGGTCGCCG CCGGACTGGG CATGGCCGGG GTGCTGATGC AGGCCCTGAC CCGCAACCCG
CTGGCCGACC CGGGACTGCT CGGCGTCACC GCCGGCGCCG CCTTCGCGAT CGTGATCTCG
GTGGCGTTCT TCGGCATCGC CTCGATGCTC GGCTTCATCT GGACCGGCTT CGGCGGCGCG
CTGGTGGCCG GGCTGGTGGT GTACCTGCTG GGCGGCGTGG GACGCGGCGG CGCCACCCCG
GTAAAGCTCG CCGTCGCGGG CGTCGCCGTC TCGGCGCTGC TGAGCGCGCT GACCAGCGGC
ATCGTGCTGA CCGACACCAA CGCGCTCAAC CGGTACCGCT ACTGGGCCGC CGGATCGCTT
GCCGGTCAGG ACACCGAGGT ACTGCTCCAG ATCGCGCCGT TCCTGCTGGT GGGCATGGTG
GTGGCGCTGT CGCTGGCGTC CTCGCTCAAC AGCCTCGCCC TGGGCGACCG GGTCGCGAAA
TCACTGGGCC GCCGCGTCGG ACTGATCCGG CTCACCGGAG CCGTGGTCGT GACCCTGCTG
ACCGGCGCCT GCGTCGCGGT GTGCGGCCCG ATCGTCTTCG TCGGACTCAT CGTCCCGCAC
GTCGCCCGGG CCATCACCGG ACCCGACTAC CGCTGGATGC TGGGCTACAC ACTGGTCCTG
GCACCGATAC TCATGCTCGC CGCCGACATC ACCGGCCGCG TCATCGCCCG CCCCACCGAG
GTCAACGTCG GCGTGGTGCT GGCCTTCATC GGCGGCCCGT TCTTCATCGC CCTGGTGCGC
CGCCGTCGAC TGGCGGAGCT GTGA
 
Protein sequence
MSVTTSPKAA AAAPARSPVS RGTWLLALTG VLAVLCLLSI MLGSRAIGAG TVLDALAGDG 
DAQTVAIVWD VRIPRTAMAL LVAAGLGMAG VLMQALTRNP LADPGLLGVT AGAAFAIVIS
VAFFGIASML GFIWTGFGGA LVAGLVVYLL GGVGRGGATP VKLAVAGVAV SALLSALTSG
IVLTDTNALN RYRYWAAGSL AGQDTEVLLQ IAPFLLVGMV VALSLASSLN SLALGDRVAK
SLGRRVGLIR LTGAVVVTLL TGACVAVCGP IVFVGLIVPH VARAITGPDY RWMLGYTLVL
APILMLAADI TGRVIARPTE VNVGVVLAFI GGPFFIALVR RRRLAEL