Gene Snas_5329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5329 
Symbol 
ID8886538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5658081 
End bp5659403 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514056 
Protein GI291302778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CCACAGACAA GCGCAGCTCA CTCTCCCGTG TGGTGGGTGC GAGCCTGATC 
GGCACGACGA TCGAGTGGTA CGACTTCTTC CTCTATGGAT CTGCCGCCGC GCTGGTGTTC
AACAAACTGT TCTTCCCCTC CGACGACCCG CTCACCGGCA CCCTGCTGGC CTTCCTCACC
TACGCCGTCG GCTTCGCCGC CCGCCCCCTC GGCGGCCTGG TGTTCGGCCA CTATGGCGAC
CGGCTGGGCC GCAAACGCCT GCTCGTCATC AGTCTTCTCC TCATGGGTGG CGCCACAGTC
CTCATCGGAT TCCTGCCAAC CCACGCCACC ATCGGCGCCG CCGCCCCGAT CCTGCTCACC
GTCCTGCGCC TCGTCCAGGG CTTCGCCCTC GGCGGCGAAT GGGGCGGCGC CGTCCTCCTG
GTCTCCGAAC ACGGCGACGA GAACCGCCGC GGCTTCTGGG CCTCCTGGCC GCAAGCCGGA
GCCCCGGGCG GAAACCTGCT GGCCACCGCT GTCCTGGCCC TGCTCGCCGC CTTCCAATCC
GACGAGGCCT TCCTGGCCTG GGGCTGGCGC ATCCCCTTCC TCCTGTCCGG AGTGCTCGTC
ATCGTCGGCC TGTGGATCCG ACTGTCCATC AGCGAATCCC CACTGTTCCA ACAAGTCGCC
GACAACCCCG AACGCCTCCC GATCCTCGGC GTCCTGCGCG AACACTGGCG CGACGTCCTC
ATCGCCATGG GCGCCCGCAT CGCCGAGAAC GTCTCCTACT ACGTCATCAC GGCCTTCGTC
CTGGTCTACG TCACCGAACA CCTCAAACTC CCCAAAGGAC TGGCCCTCAA CGCGGTCCTC
ATCGGCTCCG TCATCCACTT CGTCACCATC CCCCTATGGG GAGCGCTGTC CGACCGCCTG
GGCCGCCGCC CCGTCTACCT CCTGGGCGCC ATCGGCGTAG GCGTCTGGTC CTTCGCCTTC
TTCGCCCTCC TCGACACCCG CGCCTTCTGG CCCACCGTCC TGGCGGTCAC CATCGGCCTG
GTCCTCCACG GCGCGATGTA CGGCCCGCAA GCCGCGTTCT TCTCCGAACT GTTCGCCACC
CGCCTGCGCT ACTCCGGAGC CTCCATCGGC TACCAACTGG CATCCATAGT GGCCGGATCC
CTGGCCCCGA TCATCGCCAC CCTCCTACTC CAGAGCTACG ACTCCTCGAT CCCCATCTCC
ATCTACGTCC TGGGCGCCGC CGTCATCACC GCCATCGCGG TCCTCGTCGC CCGCGAAACC
CGAGGCCGCA ACCTCGACTT CGGCAACCGC CCCCGCCCCG TGAAAGCAGG TGACCACCGA
TGA
 
Protein sequence
MTAPTDKRSS LSRVVGASLI GTTIEWYDFF LYGSAAALVF NKLFFPSDDP LTGTLLAFLT 
YAVGFAARPL GGLVFGHYGD RLGRKRLLVI SLLLMGGATV LIGFLPTHAT IGAAAPILLT
VLRLVQGFAL GGEWGGAVLL VSEHGDENRR GFWASWPQAG APGGNLLATA VLALLAAFQS
DEAFLAWGWR IPFLLSGVLV IVGLWIRLSI SESPLFQQVA DNPERLPILG VLREHWRDVL
IAMGARIAEN VSYYVITAFV LVYVTEHLKL PKGLALNAVL IGSVIHFVTI PLWGALSDRL
GRRPVYLLGA IGVGVWSFAF FALLDTRAFW PTVLAVTIGL VLHGAMYGPQ AAFFSELFAT
RLRYSGASIG YQLASIVAGS LAPIIATLLL QSYDSSIPIS IYVLGAAVIT AIAVLVARET
RGRNLDFGNR PRPVKAGDHR