Gene Snas_5318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5318 
Symbol 
ID8886527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5648814 
End bp5649407 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003514045 
Protein GI291302767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG ACCAGGCCCC GCCCCGGCGA CTGCCGCGGG CCCAACGCCG CGACCAGATC 
CTGGCCGCGG CCACCAGCGC GTTCGCGCGC ACCGGCTTCG CCGACACCAG CCTGGACGAC
GTCTCCGCGG CGGCCGGGGT CAGCAAGGCG ATCCTGTACC GGCACTTCGA GTCCAAGACC
GAGCTGTACC GGGCGGTGCT GGACCGGATC TGCGCCAAAC TGGACGCCAC CGTCGGTACC
GACGACCACG ACGACGAGTC CATCCCGACC CTGATGCGCG CGGCCGCCAC CGACCCCGAC
GGATTCCGGC TGCTGTTTCG CTACGCGGCC CGCGAGCCCG AGTTCCGCTC CTTCGTCGAC
ACGATGTCCG GCGAATCGAC CCGCATCGCG TTGCGGCAGC TGACCGCCGA CATCCCCGAC
CCGCGCTGGG CCGGATGGGC GGCGCAGCTG GCCCCCGTCA TCACCATCGA GGCGACGCTG
GCCTGGCTGG ACGCGGGCCA ACCCGATCCC GAGCTCGCGG CCGAGCGCGT CAAGGACCTG
ATCGCCGCGC TCATCACCAC CGCCGCCGCC AGCGGCGAGA ACCCGCCCGC CTGA
 
Protein sequence
MTEDQAPPRR LPRAQRRDQI LAAATSAFAR TGFADTSLDD VSAAAGVSKA ILYRHFESKT 
ELYRAVLDRI CAKLDATVGT DDHDDESIPT LMRAAATDPD GFRLLFRYAA REPEFRSFVD
TMSGESTRIA LRQLTADIPD PRWAGWAAQL APVITIEATL AWLDAGQPDP ELAAERVKDL
IAALITTAAA SGENPPA