Gene Snas_5289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5289 
Symbol 
ID8886498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5617342 
End bp5618184 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_003514016 
Protein GI291302738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC TGCCCGAGGT GGAGACGATC CGGCGCGGCC TGGACGGCTG GGTCATCGGC 
CGTCGTATCA CCGACGTCGA GGTGCGGCAT CCGCGTGCCG TGCGGCGGCA TCACGCCGGA
CCCGCCGATT TCCGTGCCCG GCTGTTGGGG ACGACGATCA CGGGGACTCG CAGGCGGGGC
AAGTTCCTCT GGCTCCCCTT GGATTCCGGG GACGCGTTGT TGTGCCACCT CGGCATGTCG
GGCCAGCTGC TGATCGAACC GCCCGACAAA CCCGACGGCC CGCACCTGCG CATCCGCCTG
GTCTTCGACC AGGCCGAGCA CCAGCTGCGG TTTGTCGACC AGCGCACCTT CGGCGAGATG
CTGGTCAGCC CCGACGGGGC CGAGCTGCCG GGGGAGATCG CCCATATCGC GCCCGACATC
TACGATCCCG CTTTCGATCT GGCGGAGTTC TCGCGCAGGT TGCGGGCTCG GCGCGGCGAG
GTGAAGCGGG CGCTGCTGGA CCAGTCGCTG ATTTCCGGGG TGGGCAACAT CTACGCCGAC
GAGGCGCTGT GGCGGGCCCG GCTACACGGC AATCATCCCT CGCAGGAATT GTCGGACGCG
GTGGCGCGGG AGCTTGTCGA GCACATCCGG GAGGTGTTCG ACGCGGCGTT GAACGCGGGC
GGCACGTCCT TTGACGCGTT GTACGTCAAC ACGAACGGGG AATCGGGGTA TTTCGATCGC
TCGCTGGCGG TGTACGGGCG GGCCGAGGAG CCGTGTCGGC GTTGTGGGAC GCCGGTGGAG
CGGATCAAGT TCACGAACCG GTCGTCGTTC CACTGTCCTT CCTGTCAGAT CGTTCCCGGA
TAG
 
Protein sequence
MPELPEVETI RRGLDGWVIG RRITDVEVRH PRAVRRHHAG PADFRARLLG TTITGTRRRG 
KFLWLPLDSG DALLCHLGMS GQLLIEPPDK PDGPHLRIRL VFDQAEHQLR FVDQRTFGEM
LVSPDGAELP GEIAHIAPDI YDPAFDLAEF SRRLRARRGE VKRALLDQSL ISGVGNIYAD
EALWRARLHG NHPSQELSDA VARELVEHIR EVFDAALNAG GTSFDALYVN TNGESGYFDR
SLAVYGRAEE PCRRCGTPVE RIKFTNRSSF HCPSCQIVPG