Gene Snas_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5253 
Symbol 
ID8886462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5579327 
End bp5580346 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513980 
Protein GI291302702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.402527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAATG AGACTGAACT GGTGAACGCC CAACTGAGTC TTCGCCCCAA TCTCCGAGTG 
ATGTCGACCT GGCACAAGCC GCTCATGGTC AACGTGACCC TCATGACCGC CCTCGTCCTG
GTGTCGACGG TGGGCCTGTT CCTGGACGAC CGTGTCCTGT TGAACGAGTC GATCTGGCTC
AAACCGCTGA AGTTCGGCTT CGCCTTCGCC GTGTACTCCG CGACGCTGGC GTGGCTGTTG
ACGAAACTGA AGAAGGCCAA GCGGTTCGGC TGGTGGTTCG GCCTCATGTT CGCCGTCTTC
GGCATCACCG ATGTGGCGGT CATCGCGCTG GCCGCGTCGC AGGGAACCTT CAGCCACTTC
GCCGAGGGCG ACAGCATGGT CAACCAGATC GTCCAGACCG TGTTCCAGTA TGGAGTGCCG
CCGCTGTTGA TCTCGAACCT GGTCATCGGG ATCCTGGTCC TGGTGCAGCG CACCGGGGAC
CGGGCACTGT CGTGGGCGCT GCGGGCCGGG CTGCTGTTGT CGACCGCGGG GATGGCGGTC
GCGTTCGCGC TGATTCCCGC GAGCTACGCG GGCGAGCGCA CCGTCACCGA TGCCAACGGG
GACAAGGTGG CCATGTCCGT CGGGCACGGC ATCGGCGACC CGGACGGTAC CGGCATGCCG
CTGACGAACT GGAGCTCCAC CGGCGGCGAC CTGCGGGTAC CGCACTTCAT CGGGCTGCAC
GGCATCCACG TGCTGCTGCT GACGGTGCTG GTGCTGGCCG TGCTGGCGGC CCGCGTCGCG
TGGCTGCGGG ACGACCGGGT GCGGGCGGGC CTCGTGGGCG CCGTCGCGAT CGGCTACACC
GGACTGTTCG CGGTCACGAC CTGGCAGGCG GCTCGAGGCC AGTCGCTCAT CCACCCCGAC
TCGTCGACGC TGCTGGCGAT GGCGGGCGCG GTGCTGGTGG CCGCGGCGGT GGCGCTGGTG
ACGGTGGCGG CGGGACGCCG TCGCGCCGGC TCCGCGAAGG AACTGGTCAC GGCAGTGTGA
 
Protein sequence
MSNETELVNA QLSLRPNLRV MSTWHKPLMV NVTLMTALVL VSTVGLFLDD RVLLNESIWL 
KPLKFGFAFA VYSATLAWLL TKLKKAKRFG WWFGLMFAVF GITDVAVIAL AASQGTFSHF
AEGDSMVNQI VQTVFQYGVP PLLISNLVIG ILVLVQRTGD RALSWALRAG LLLSTAGMAV
AFALIPASYA GERTVTDANG DKVAMSVGHG IGDPDGTGMP LTNWSSTGGD LRVPHFIGLH
GIHVLLLTVL VLAVLAARVA WLRDDRVRAG LVGAVAIGYT GLFAVTTWQA ARGQSLIHPD
SSTLLAMAGA VLVAAAVALV TVAAGRRRAG SAKELVTAV