Gene Snas_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5242 
Symbol 
ID8886451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5565010 
End bp5566755 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content68% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003513969 
Protein GI291302691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.314771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGCCG GACAAGTCCT CAATGGCCGG TATCGGCTCG TCGAACGGGT TGGCCTGGGC 
GGTATGGGCG AGGTGTGGAG CGCCACCGAC ACCACGCTGG ACCGCACCGT CGCCCTGAAA
CTGCTGCGGG CCGACCTGTC CGACGACGTC GATTCACGGC GCCGGTTCCA GCAGGAGGCG
CGATACCTGG CGAAGCTCGC GATCCCCGGT GCCGCGCGGA TCCACGACGT CGGTGAGGAT
CAGCTCGACG GCGACACCGT GACCTACCTG GTGATGGAGT TCGTGCCGGG CAGGACACTC
GCGCGACTGC TCGCCGAACG CGGCACCCTG AGCGCGGCCG AGCTGCTGCC CCTCCTGGAA
CAGGTGGCGC GGGCGCTGGA TGTCGCGCAC CGCAACGGCA TCGTGCACCG CGACATCAAG
CCGGGCAACA TCATGGTCGA CGACGACGGC CGGGCGACCC TGCTGGACTT CGGGATCGCC
CGGGCCGTCG GGGACGCCAA GGTGACGCTG TCCGGGCAGA TCATGGGGAC GTTGAGCTAT
GTGTCGCCCG AGCAGGTCAA CGGCGACGCC ATCGGCCCCG AATCCGATGT GTACAGTCTC
GGTGCGGTGG CCTTCGAGTG CCTCAGCGGA ACACCGCCGT TCACCGGCGC GGCGGTGGAC
ATCCTCAGCG GGCACCTGCG AACACCGCCC CCCGATCCGC CGCCCGCCAC ACCCAGGTCC
GTGGCCCGGG CCGTCAAGCG CGCGCTGGCC AAGGCACCGC AGGACCGCTT CCTGACGGCC
TCGGACTTCG TGGCCGATTG CCAGGGCGGA CTGCCCGACA CGAAACCGGA ACGGCGCCGG
GGCAACCGCC GCGTCCTGAC GCGCGCCACC ATGGTGACGG CCGCGATCCT GGCGGTCGCG
CTCGTCGTGA CGGTGGTCGT GGTCGGCCTG TGGCGGCCGG GCAGCGGCGA TCTGTCCACT
CCCGACGAGG GCGGGAAGTC CTCGCCCGGC TGGGTTCCCG AGGGCCTGGA GGACGGCACC
CTGCTGGACT CCCATGACGG CGTGATCTAT CGGGTGGACT CCGACGGCCA TGTGTCCTGG
TACCGCCACA CCGACCCCAA AGCAGGAGCG CCCACATGGG CCGAAGGCTC GGGCAAGCGC
GTCGGCGGGG ACTGGAAGGG CCGCACGGTG ATCGCGGCCA ACCGAGGCGT TCTCTACGCG
ATCGACGACA ACGGTGACCT GTACTGGTAC CGCCACACCG ATCCCAAGGG CGGCGCCGAC
AAGTGGAGCA AGGGCTCGGG AACCCGGGTG GGGCACGACT TCGACAAGTA CATCCGTATC
TTCGCCGCCT CCGCGAATGT TCTCCACACC GTGGACAAGA AGGGGCGGCT GTTCTGGAAC
AAGCACACCT CACCAGATGA TGGGCCGGTC GAATGGCAAC CTGATTCGGG AACGGAGATC
GGCAGCGGCT GGAACACACC CATGGCGACG CTGGTGAGTG GCGGCGACGG CGTCCTATAT
GTCACACGGC CGAACGGCGA CCTCCTGTGG CACGCCCCGC GCGACTTCAG GGACGTGAGT
TCCCCCTGGG ACAGGATCAC CATCGCCGAG GGCTGGGACG ACTACGAAAG CTTCGTCGCC
AGCAGCACCG GAGTCATCTA TGCCCGCACC CGGGACGGGA AGCTGTACTG GTTCCGGCAC
CTCAACCCCG ACAACGGCCT CGATGAGTGG TCAAGCGACA AGGGGAAACT GCTCAACCCG
TCGTGA
 
Protein sequence
MRAGQVLNGR YRLVERVGLG GMGEVWSATD TTLDRTVALK LLRADLSDDV DSRRRFQQEA 
RYLAKLAIPG AARIHDVGED QLDGDTVTYL VMEFVPGRTL ARLLAERGTL SAAELLPLLE
QVARALDVAH RNGIVHRDIK PGNIMVDDDG RATLLDFGIA RAVGDAKVTL SGQIMGTLSY
VSPEQVNGDA IGPESDVYSL GAVAFECLSG TPPFTGAAVD ILSGHLRTPP PDPPPATPRS
VARAVKRALA KAPQDRFLTA SDFVADCQGG LPDTKPERRR GNRRVLTRAT MVTAAILAVA
LVVTVVVVGL WRPGSGDLST PDEGGKSSPG WVPEGLEDGT LLDSHDGVIY RVDSDGHVSW
YRHTDPKAGA PTWAEGSGKR VGGDWKGRTV IAANRGVLYA IDDNGDLYWY RHTDPKGGAD
KWSKGSGTRV GHDFDKYIRI FAASANVLHT VDKKGRLFWN KHTSPDDGPV EWQPDSGTEI
GSGWNTPMAT LVSGGDGVLY VTRPNGDLLW HAPRDFRDVS SPWDRITIAE GWDDYESFVA
SSTGVIYART RDGKLYWFRH LNPDNGLDEW SSDKGKLLNP S