Gene Snas_5200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5200 
Symbol 
ID8886409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5521419 
End bp5522264 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content66% 
IMG OID 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_003513928 
Protein GI291302650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.569737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGTG AATTCGTATT GACCCTCTCG TGTCCCGACA AGGTCGGCAT CGTCTACGCG 
GTCGCGGGCT TTCTGGCCGA CCGCGACGGC AACATCAGCG ACAGCCAGCA GTTCTCCGAT
CCCGGCAGTG GACGCTTCTT CATGCGCGTC CAGTTCCACG CCCACACCAC CGTCGACCAA
CTGCGCGCCG ACTTCGGCCC CACCGCCGCA CCATACAATA TGGACTGGCA ACTCCACGAC
CTCGCCGTCA AACCCCGGGT CCTGATCCTC GCCTCCAAAC AAGGCCACTG CCTCAACGAC
CTCCTCTACC GCTTCCGCTC CGGCGCCCTA CGGGGCGAAC TGACCGCGGT CGCGTCCAAC
CACCTCGACT GGGCCGAGCT CACCGAATCG TCCAAAGTCC CGTTCCACCA CCTCCCCCTG
ACCCCCGACA CCCGCGCCAA CCAGGAACAG CGCCTGCTCG ACCTCATCGC CGCCGACCGC
ATCGACGTCG TCGTCCTGGC CCGCTACATG CAGATCCTCA CCGACGACTT CTGCGCCAAA
CTCCCCGGCC AGATCATCAA CATCCACCAC TCGTTCCTGC CCAGCTTCAA AGGCGCCCAG
CCCTACCACC AGGCCTACGA ACGCGGCGTG AAACTCATCG GCGCCACCGC CCACTACGTC
ACCGCCGAAC TCGACGAGGG CCCCATCATC GAGCAGGAGA CCGCCCGCGT CGACCACGCC
ATGGCCCCGT CGCGCCTCAT CGCCACCGGA CGCGATCTGG AGAGCACCGT CCTGGCACGC
GCCCTGTCCT GGCACCTGGA CCACCGCGTC CTCCTCAACG GCCACCGCAC CGTCGTCTTC
CGCTGA
 
Protein sequence
MSREFVLTLS CPDKVGIVYA VAGFLADRDG NISDSQQFSD PGSGRFFMRV QFHAHTTVDQ 
LRADFGPTAA PYNMDWQLHD LAVKPRVLIL ASKQGHCLND LLYRFRSGAL RGELTAVASN
HLDWAELTES SKVPFHHLPL TPDTRANQEQ RLLDLIAADR IDVVVLARYM QILTDDFCAK
LPGQIINIHH SFLPSFKGAQ PYHQAYERGV KLIGATAHYV TAELDEGPII EQETARVDHA
MAPSRLIATG RDLESTVLAR ALSWHLDHRV LLNGHRTVVF R