Gene Snas_5169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5169 
Symbol 
ID8886377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5492288 
End bp5493601 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513897 
Protein GI291302619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGAAACGCT TCGAGCCCAC ATCGCCACCG TGCTGGCCCG GGCCCGCGAC 
CGCACCCACA CCCTGACCGA CGCGGTGGAC GAGACCGACC TCATCGCACA GCACTCGCCG
CTGATGTCCC CGCTGGTGTG GGATTTCGCA CACATCGGCA ATCAGGAGGA GCTGTGGCTG
GTGCGCGACG TCGGCGGCCG GGAACCGGTG CGGGCCGATA TCGACGGCAT GTACGACGCG
TTCCAGAACC CGCGCCGCGA CCGGCCGCAA CTGCCGCTGC TGCGACCGGA CGAGGCCCGC
GACTACACCC GGGTGGTGCG CGACAAGGTC TTCGACGTCC TGGAAGCCAA CGCGCTCAAG
GGACACCGAC TGGTCGACGA GGGCTTCGCC TTCGGGATGA TCGCGCAGCA CGAACAACAG
CACGACGAGA CGATGCTGGC CACCCACCAG CTGCGCGCCG GTGCGGCGGT GCTGACCGCG
CCACCCCCGC CCGCGTCGCG CGCCCCGGTC GCGGCCGAGG TGCTGATCCC CGGCGGGCCG
TTCACGATGG GCACCTCCAC CGAACCGTGG GCGCTGGACA ACGAGCGCCC CGCGCACGCC
GTCCACGTGG ACGCGTTCGT CATCGACGCC GCGCCGGTCA CCAACGGCCA GTACCTCGGA
TTCATTGAGG ACGGCGGCTA CGACGACCCG CGCTGGTGGA GCGACGCGGG CTGGCGGCAC
CGGCGCACGG AGAACCTGAC CGCCCCGGCG CACTGGCACC CCGACCCCGG CGGCTGGCTC
TACACCCGCT TCGGGGTCAC CCGGCCGCTC ATCCCGGACG AACCGGTGGT GCACGTGTGC
TTCCATGAGG CCCGCGCCTA CGCGCGCTGG GCGGGCAAGC GACTGCCCAC CGAGGCCGAG
TGGGAGAAGT CCGCCCGCTT CGACCCGGCC ACCGGCCGCT CCCGCCGGTT CCCCTGGGGC
GACGACGAAC CCGACGAGAC CCGCGCCAAT CTCGGCCAGC GACACCTGGC CCCGGCACCC
GTGGGCGCCT ACCCGCGCGG CGCGTCGGCG CTCGGCGTCC ACCAGCTCAT CGGTGACGTT
TGGGAATGGA CCGACACCGA CTTCCACGGC TACCCGGGTT TCACGGCCTT CCCGTACCGC
GAGTACTCGG AGGTGTTCTT CGGCGACAAG TACAAGGTGC TGCGCGGCGG CTCCTTCGGC
ACCGACGCCG TCGCCTGCCG GGGCAGCTTC CGCAACTGGG ACCTGCCGGT GCGGCGCCAG
ATCTTCGCCG GACTGCGTTG CGCCCGCGAC CCCCGCCCCG GCGAGGCGGG CTGA
 
Protein sequence
MTDTETLRAH IATVLARARD RTHTLTDAVD ETDLIAQHSP LMSPLVWDFA HIGNQEELWL 
VRDVGGREPV RADIDGMYDA FQNPRRDRPQ LPLLRPDEAR DYTRVVRDKV FDVLEANALK
GHRLVDEGFA FGMIAQHEQQ HDETMLATHQ LRAGAAVLTA PPPPASRAPV AAEVLIPGGP
FTMGTSTEPW ALDNERPAHA VHVDAFVIDA APVTNGQYLG FIEDGGYDDP RWWSDAGWRH
RRTENLTAPA HWHPDPGGWL YTRFGVTRPL IPDEPVVHVC FHEARAYARW AGKRLPTEAE
WEKSARFDPA TGRSRRFPWG DDEPDETRAN LGQRHLAPAP VGAYPRGASA LGVHQLIGDV
WEWTDTDFHG YPGFTAFPYR EYSEVFFGDK YKVLRGGSFG TDAVACRGSF RNWDLPVRRQ
IFAGLRCARD PRPGEAG