Gene Snas_5141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5141 
Symbol 
ID8886349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5463902 
End bp5465635 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content73% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003513869 
Protein GI291302591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.265268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.427463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCCG AACTGCTGTC GCCCGACGCC GAGGTGTCCG AGCGGGCCTG CGCGGCGGTG 
GGCAAGCTGC TGGACGCGGC CCGGCGGGCG AACCGCCGCG CGCTGCGGGC ACAGCGCCGG
GCGGCGAGGC CCGACGCCGA CACCAAACGC ACCGCGCGAC TGGAGCAGCG CATCACCCAG
CTGCGGGCGG TGCGGGACCG GCTCGACGGC CAGGTGTCCA CACTGTCGGC CGAGAACGCC
GAACTACGGT CCACCATCGA CAATCTGGAC GGCGAACTCG AACAGCTGCG GCGGCACCTC
GACGTGGCCT ACGCCCGGAT GGACCGGGTC CAGACCGAAC GCGACGAGGC GCTGCGGCAG
GCCGAGCGCG CCGCGCCGCG GGTCAGCGTG GGCGCCGACC TGTCGGTGTC GGTGCGGGTG
CTGGGCGGCG GCACCGAGAT CGGCGGTTCC TGCGTGCTGA TCACCGGCGG CGGCACCCGG
CTGCTCGTCG ACGCCGGAAC CCGTCCCTCC GGTGTGGACG AGGACTCGCT GGCCCCCGCC
GACATCGCCG AGGTGTACGC CGAACCCCCG GACGCCATTG TGGTCACCCA TGCGCACAAC
GACCACGCGG GCTGGGTTCC GGCGCTGGTC AACCGGTTCC CGAACCTGCC GGTGTTCGCC
TCCACGGCCA CCTGCGACCT GCTGGGCACC ATGTGGGCGG ACTCGGCGAA GGTGCTGGCG
TTCAAGGCCG ACACCGACGA GTCCTGGGCG GGCGGACCGC TGCCGCCCTA CAAGCAGTCC
GACGTGGACG CGGCGGTGGC GGCGCTGATC GACGTGCCGG TGGGGCATCC GCGCCGGGTC
GGGGCGCTGT CCTTCGAGCT GTTCGACGCT GGGCACATCA TCGGCGCCAC CGGCGTGGTC
GTGACCGCCG GGGACCAGCG CGTCGTCGTG TCGGGCGACG TGTCCGGTCC GGGCCAGCTG
AGCGTCGGTG GCCTGCACCT GCCGGACGCA GGCGTAGGCG CCGACCTGCT GCTACTGGAA
TCGACCTACG CCGGGGCCGG GAAACTGCCG CCCCGCGAGG CGGTCATCGA CCAGTTCGTC
TCCGATGTGG ACCGGATCCT GGGTGCCGGT GGCCGGGTGC TGGTGCCCGC GTTCGCGCTC
GGCCGGGCCC AGGAGATCGC GCTGATCTGC GGCCGTCACC TGCCCGACGC CGAGGTCCTG
GTCGACGGTA TGGCCCGCGA CCTCAGCCAC GCGTACCGCC GCCACGACGG CCCGGACGGC
GAACGCGTGC AGGTGTTCTC GGGCCGGGTC CGCCCGGTGG AGCCGGGCCG CACCCGCCGC
GAGATCGCCG ACAAACGGCC CTGCGTCGTG GTGGCCACTT CGGGGATGCT CTCCGGCGGC
CCCGCCGTCG GTTGGGCCCG CGAGATCCTC ACCGAACCCG AGTCGGGCCT GATGGTGGTC
GGTTACCAGG ACGCCGACAG TCCGGGCTCC CGGCTGCTGG GTCTGGCCGC CGCCGGTGGC
GGCCGGTTCG ACCTGCCCGG CATGAACGAA CCGATCGAGG TCTCGGCCCA CATCGGCAAC
TACCGGCTGG GGGCGCACGC CTCCGAGGAC GATCTGGTCA AGATCGCCGC CGAGGCCCGG
CCGCAGACCC TGATGCTGGT GCACGGCCGT CTGGCGGCCC AGCGCCGCTT CGCCGACCGG
CTGCGACTGC GGCAGCAGAA GGTCATCCTC GCCGACCGCC CCTGGTCGTC CTGA
 
Protein sequence
MAAELLSPDA EVSERACAAV GKLLDAARRA NRRALRAQRR AARPDADTKR TARLEQRITQ 
LRAVRDRLDG QVSTLSAENA ELRSTIDNLD GELEQLRRHL DVAYARMDRV QTERDEALRQ
AERAAPRVSV GADLSVSVRV LGGGTEIGGS CVLITGGGTR LLVDAGTRPS GVDEDSLAPA
DIAEVYAEPP DAIVVTHAHN DHAGWVPALV NRFPNLPVFA STATCDLLGT MWADSAKVLA
FKADTDESWA GGPLPPYKQS DVDAAVAALI DVPVGHPRRV GALSFELFDA GHIIGATGVV
VTAGDQRVVV SGDVSGPGQL SVGGLHLPDA GVGADLLLLE STYAGAGKLP PREAVIDQFV
SDVDRILGAG GRVLVPAFAL GRAQEIALIC GRHLPDAEVL VDGMARDLSH AYRRHDGPDG
ERVQVFSGRV RPVEPGRTRR EIADKRPCVV VATSGMLSGG PAVGWAREIL TEPESGLMVV
GYQDADSPGS RLLGLAAAGG GRFDLPGMNE PIEVSAHIGN YRLGAHASED DLVKIAAEAR
PQTLMLVHGR LAAQRRFADR LRLRQQKVIL ADRPWSS