Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5141 |
Symbol | |
ID | 8886349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5463902 |
End bp | 5465635 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_003513869 |
Protein GI | 291302591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.265268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.427463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGCCG AACTGCTGTC GCCCGACGCC GAGGTGTCCG AGCGGGCCTG CGCGGCGGTG GGCAAGCTGC TGGACGCGGC CCGGCGGGCG AACCGCCGCG CGCTGCGGGC ACAGCGCCGG GCGGCGAGGC CCGACGCCGA CACCAAACGC ACCGCGCGAC TGGAGCAGCG CATCACCCAG CTGCGGGCGG TGCGGGACCG GCTCGACGGC CAGGTGTCCA CACTGTCGGC CGAGAACGCC GAACTACGGT CCACCATCGA CAATCTGGAC GGCGAACTCG AACAGCTGCG GCGGCACCTC GACGTGGCCT ACGCCCGGAT GGACCGGGTC CAGACCGAAC GCGACGAGGC GCTGCGGCAG GCCGAGCGCG CCGCGCCGCG GGTCAGCGTG GGCGCCGACC TGTCGGTGTC GGTGCGGGTG CTGGGCGGCG GCACCGAGAT CGGCGGTTCC TGCGTGCTGA TCACCGGCGG CGGCACCCGG CTGCTCGTCG ACGCCGGAAC CCGTCCCTCC GGTGTGGACG AGGACTCGCT GGCCCCCGCC GACATCGCCG AGGTGTACGC CGAACCCCCG GACGCCATTG TGGTCACCCA TGCGCACAAC GACCACGCGG GCTGGGTTCC GGCGCTGGTC AACCGGTTCC CGAACCTGCC GGTGTTCGCC TCCACGGCCA CCTGCGACCT GCTGGGCACC ATGTGGGCGG ACTCGGCGAA GGTGCTGGCG TTCAAGGCCG ACACCGACGA GTCCTGGGCG GGCGGACCGC TGCCGCCCTA CAAGCAGTCC GACGTGGACG CGGCGGTGGC GGCGCTGATC GACGTGCCGG TGGGGCATCC GCGCCGGGTC GGGGCGCTGT CCTTCGAGCT GTTCGACGCT GGGCACATCA TCGGCGCCAC CGGCGTGGTC GTGACCGCCG GGGACCAGCG CGTCGTCGTG TCGGGCGACG TGTCCGGTCC GGGCCAGCTG AGCGTCGGTG GCCTGCACCT GCCGGACGCA GGCGTAGGCG CCGACCTGCT GCTACTGGAA TCGACCTACG CCGGGGCCGG GAAACTGCCG CCCCGCGAGG CGGTCATCGA CCAGTTCGTC TCCGATGTGG ACCGGATCCT GGGTGCCGGT GGCCGGGTGC TGGTGCCCGC GTTCGCGCTC GGCCGGGCCC AGGAGATCGC GCTGATCTGC GGCCGTCACC TGCCCGACGC CGAGGTCCTG GTCGACGGTA TGGCCCGCGA CCTCAGCCAC GCGTACCGCC GCCACGACGG CCCGGACGGC GAACGCGTGC AGGTGTTCTC GGGCCGGGTC CGCCCGGTGG AGCCGGGCCG CACCCGCCGC GAGATCGCCG ACAAACGGCC CTGCGTCGTG GTGGCCACTT CGGGGATGCT CTCCGGCGGC CCCGCCGTCG GTTGGGCCCG CGAGATCCTC ACCGAACCCG AGTCGGGCCT GATGGTGGTC GGTTACCAGG ACGCCGACAG TCCGGGCTCC CGGCTGCTGG GTCTGGCCGC CGCCGGTGGC GGCCGGTTCG ACCTGCCCGG CATGAACGAA CCGATCGAGG TCTCGGCCCA CATCGGCAAC TACCGGCTGG GGGCGCACGC CTCCGAGGAC GATCTGGTCA AGATCGCCGC CGAGGCCCGG CCGCAGACCC TGATGCTGGT GCACGGCCGT CTGGCGGCCC AGCGCCGCTT CGCCGACCGG CTGCGACTGC GGCAGCAGAA GGTCATCCTC GCCGACCGCC CCTGGTCGTC CTGA
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Protein sequence | MAAELLSPDA EVSERACAAV GKLLDAARRA NRRALRAQRR AARPDADTKR TARLEQRITQ LRAVRDRLDG QVSTLSAENA ELRSTIDNLD GELEQLRRHL DVAYARMDRV QTERDEALRQ AERAAPRVSV GADLSVSVRV LGGGTEIGGS CVLITGGGTR LLVDAGTRPS GVDEDSLAPA DIAEVYAEPP DAIVVTHAHN DHAGWVPALV NRFPNLPVFA STATCDLLGT MWADSAKVLA FKADTDESWA GGPLPPYKQS DVDAAVAALI DVPVGHPRRV GALSFELFDA GHIIGATGVV VTAGDQRVVV SGDVSGPGQL SVGGLHLPDA GVGADLLLLE STYAGAGKLP PREAVIDQFV SDVDRILGAG GRVLVPAFAL GRAQEIALIC GRHLPDAEVL VDGMARDLSH AYRRHDGPDG ERVQVFSGRV RPVEPGRTRR EIADKRPCVV VATSGMLSGG PAVGWAREIL TEPESGLMVV GYQDADSPGS RLLGLAAAGG GRFDLPGMNE PIEVSAHIGN YRLGAHASED DLVKIAAEAR PQTLMLVHGR LAAQRRFADR LRLRQQKVIL ADRPWSS
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